RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 NFRKBQ6P4R8 1299 aa15.25■□□□□ 0.03
LMNA-210ENST00000469565 POTEGQ6S5H5 508 aa15.25■□□□□ 0.03
LMNA-210ENST00000469565 USP49Q70CQ1 688 aa15.25■□□□□ 0.03
LMNA-210ENST00000469565 OTUD6AQ7L8S5 288 aa15.25■□□□□ 0.03
LMNA-210ENST00000469565 C4orf19Q8IY42 314 aa15.25■□□□□ 0.03
LMNA-210ENST00000469565 PIGOQ8TEQ8 1089 aa15.25■□□□□ 0.03
LMNA-210ENST00000469565 CCDC43Q96MW1 224 aaKnown RBP15.25■□□□□ 0.03
LMNA-210ENST00000469565 CDX2Q99626 313 aaPredicted RBP15.25■□□□□ 0.03
LMNA-210ENST00000469565 SH2D3AQ9BRG2 576 aa15.25■□□□□ 0.03
LMNA-210ENST00000469565 MMTAG2Q9BU76 263 aaKnown RBP15.25■□□□□ 0.03
LMNA-210ENST00000469565 PANK2Q9BZ23 570 aa15.25■□□□□ 0.03
LMNA-210ENST00000469565 DDX19AQ9NUU7 478 aaKnown RBP15.25■□□□□ 0.03
LMNA-210ENST00000469565 PRKAG2Q9UGJ0 569 aa15.25■□□□□ 0.03
LMNA-210ENST00000469565 KIAA1024Q9UPX6 916 aa15.25■□□□□ 0.03
LMNA-210ENST00000469565 ATP11BQ9Y2G3 1177 aa15.25■□□□□ 0.03
LMNA-210ENST00000469565 KDM3AQ9Y4C1 1321 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 LOXHD1Q8IVV2 1947 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 GOLGA6L4A6NEF3 574 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 GNAT1P11488 350 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 YWHABP31946 246 aaKnown RBP15.24■□□□□ 0.03
LMNA-210ENST00000469565 RTP1P59025 263 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 ZNF200P98182 395 aaPredicted RBP15.24■□□□□ 0.03
LMNA-210ENST00000469565 KARSQ15046 597 aaKnown RBP15.24■□□□□ 0.03
LMNA-210ENST00000469565 ECM1Q16610 540 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 CSPP1Q1MSJ5 1256 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 TRIM60Q495X7 471 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 XKR9Q5GH70 373 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 PLA2G4FQ68DD2 849 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 GDF6Q6KF10 455 aaPredicted RBP15.24■□□□□ 0.03
LMNA-210ENST00000469565 MAFAQ8NHW3 353 aaPredicted RBP15.24■□□□□ 0.03
LMNA-210ENST00000469565 TRAPPC12Q8WVT3 735 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 NACC1Q96RE7 527 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 CCDC39Q9UFE4 941 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 GTF2IRD1Q9UHL9 959 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 NOD1Q9Y239 953 aa15.24■□□□□ 0.03
LMNA-210ENST00000469565 NRCAMQ92823 1304 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 ARID2Q68CP9 1835 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 DCDC2CA8MYV0 355 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 TLR3O15455 904 aaKnown RBP15.23■□□□□ 0.03
LMNA-210ENST00000469565 NPEPPSP55786 919 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 GRB10Q13322 594 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 PTGISQ16647 500 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 ZNF484Q5JVG2 852 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 AXDND1Q5T1B0 1012 aaPredicted RBP15.23■□□□□ 0.03
LMNA-210ENST00000469565 ZNF579Q8NAF0 562 aaKnown RBP15.23■□□□□ 0.03
LMNA-210ENST00000469565 CEP170P1Q96L14 293 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 CCSER1Q9C0I3 900 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 NT5C3AQ9H0P0 336 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 SEMA6BQ9H3T3 888 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 TRMT13Q9NUP7 481 aaKnown RBP15.23■□□□□ 0.03
LMNA-210ENST00000469565 FAM13BQ9NYF5 915 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 DNM3Q9UQ16 869 aa15.23■□□□□ 0.03
LMNA-210ENST00000469565 MROH7Q68CQ1 1323 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 RRN3P2A6NIE6 340 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 E9PMD0 336 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 B4GALT4O60513 344 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 STBD1O95210 358 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 SSBP05455 408 aaKnown RBP eCLIP15.22■□□□□ 0.03
LMNA-210ENST00000469565 MUTP22033 750 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 CDK7P50613 346 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 TLE2Q04725 743 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 PTPN11Q06124 597 aaPredicted RBP15.22■□□□□ 0.03
LMNA-210ENST00000469565 RRAGBQ5VZM2 374 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 ADALQ6DHV7 355 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 SHC4Q6S5L8 630 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 ANO5Q75V66 913 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 SESTD1Q86VW0 696 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 PDILTQ8N807 584 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 SLC43A3Q8NBI5 491 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 LMBR1Q8WVP7 490 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 PNMA5Q96PV4 448 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 NIFKQ9BYG3 293 aaKnown RBP15.22■□□□□ 0.03
LMNA-210ENST00000469565 SEZ6LQ9BYH1 1024 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 TRPV6Q9H1D0 765 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 CYP26B1Q9NR63 512 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 BMP2KQ9NSY1 1161 aaPredicted RBP15.22■□□□□ 0.03
LMNA-210ENST00000469565 EYSQ5T1H1 3165 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 MYH11P35749 1972 aa15.22■□□□□ 0.03
LMNA-210ENST00000469565 ARHGEF35A5YM69 484 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 TREHO43280 583 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 LYPLA2O95372 231 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 PLCG1P19174 1290 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 KLRC1P26715 233 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 TBC1D8BQ0IIM8 1120 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 HIC1Q14526 733 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 DHX8Q14562 1220 aaKnown RBP15.21■□□□□ 0.03
LMNA-210ENST00000469565 METTL13Q8N6R0 699 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 ZBTB10Q96DT7 871 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 SUGCTQ9HAC7 445 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 ANKEF1Q9NU02 776 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 TUBE1Q9UJT0 475 aa15.21■□□□□ 0.03
LMNA-210ENST00000469565 COL1A2P08123 1366 aa15.21■□□□□ 0.02
LMNA-210ENST00000469565 LAMA2P24043 3122 aaKnown RBP15.2■□□□□ 0.02
LMNA-210ENST00000469565 A0A1B0GVL5 298 aa15.2■□□□□ 0.02
LMNA-210ENST00000469565 SLC26A4O43511 780 aa15.2■□□□□ 0.02
LMNA-210ENST00000469565 CYP2C9P11712 490 aa15.2■□□□□ 0.02
LMNA-210ENST00000469565 XRCC6P12956 609 aaKnown RBP eCLIP15.2■□□□□ 0.026e-7■■■■□ 20.4
LMNA-210ENST00000469565 SNX17Q15036 470 aa15.2■□□□□ 0.02
LMNA-210ENST00000469565 TMEM119Q4V9L6 283 aa15.2■□□□□ 0.02
LMNA-210ENST00000469565 HYIQ5T013 277 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms