RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 NPIPB8E9PQR5 432 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 KIF3BO15066 747 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 MAFGO15525 162 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 COMTP21964 271 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 EXOSC10Q01780 885 aaKnown RBP5.96□□□□□ -1.46
SCFD1-205ENST00000469043 OS9Q13438 667 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-205ENST00000469043 SQSTM1Q13501 440 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 TKFCQ3LXA3 575 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 LONRF3Q496Y0 759 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 DPP8Q6V1X1 898 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-205ENST00000469043 KRT26Q7Z3Y9 468 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 RAVER1Q8IY67 606 aaKnown RBP5.96□□□□□ -1.46
SCFD1-205ENST00000469043 IFNL3Q8IZI9 196 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 EDAQ92838 391 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 TSR2Q969E8 191 aaKnown RBP5.96□□□□□ -1.46
SCFD1-205ENST00000469043 PNMA2Q9UL42 364 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 MSRB2Q9Y3D2 182 aa5.96□□□□□ -1.46
SCFD1-205ENST00000469043 IQCA1LA6NCM1 817 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 FAM47E-STBD1D6RA91 191 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 PLIN1O60240 522 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 CUTAO60888 179 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 GNALP38405 381 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 CDKN1CP49918 316 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-205ENST00000469043 GPR85P60893 370 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 FHL2Q14192 279 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 BRDTQ58F21 947 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-205ENST00000469043 MIIPQ5JXC2 388 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 RNF207Q6ZRF8 634 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 C11orf96Q7Z7L8 435 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 TACO1Q9BSH4 297 aaKnown RBP5.95□□□□□ -1.46
SCFD1-205ENST00000469043 MAF1Q9H063 256 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 CSRNP2Q9H175 543 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 LAS1LQ9Y4W2 734 aaKnown RBP5.95□□□□□ -1.46
SCFD1-205ENST00000469043 COMMD10Q9Y6G5 202 aa5.95□□□□□ -1.46
SCFD1-205ENST00000469043 NKRFO15226 690 aaKnown RBP eCLIP5.94□□□□□ -1.46
SCFD1-205ENST00000469043 PRODHO43272 600 aa5.94□□□□□ -1.46
SCFD1-205ENST00000469043 WDHD1O75717 1129 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-205ENST00000469043 IL18BPO95998 194 aa5.94□□□□□ -1.46
SCFD1-205ENST00000469043 POLD1P28340 1107 aa5.94□□□□□ -1.46
SCFD1-205ENST00000469043 CNGA1P29973 690 aa5.94□□□□□ -1.46
SCFD1-205ENST00000469043 EPHA5P54756 1037 aa5.94□□□□□ -1.46
SCFD1-205ENST00000469043 SETQ01105 290 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-205ENST00000469043 ABHD18Q0P651 414 aa5.94□□□□□ -1.46
SCFD1-205ENST00000469043 USP39Q53GS9 565 aaKnown RBP5.94□□□□□ -1.46
SCFD1-205ENST00000469043 AGBL4Q5VU57 503 aa5.94□□□□□ -1.46
SCFD1-205ENST00000469043 KCNT2Q6UVM3 1135 aa5.94□□□□□ -1.46
SCFD1-205ENST00000469043 KCTD1Q719H9 257 aa5.94□□□□□ -1.46
SCFD1-205ENST00000469043 CELF2-AS1Q8N7Q2 184 aa5.94□□□□□ -1.46
SCFD1-205ENST00000469043 AARSD1Q9BTE6 412 aaKnown RBP5.94□□□□□ -1.46
SCFD1-205ENST00000469043 ING1Q9UK53 422 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-205ENST00000469043 ATP8A1Q9Y2Q0 1164 aa5.94□□□□□ -1.46
SCFD1-205ENST00000469043 A0A0U1RQG5 324 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-205ENST00000469043 PDPK1O15530 556 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 CAND2O75155 1236 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 SOD2P04179 222 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 ZNF888P0CJ79 500 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-205ENST00000469043 FGFR1P11362 822 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 CR2P20023 1033 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 RASGRF1Q13972 1273 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 SAFB2Q14151 953 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCFD1-205ENST00000469043 C2orf27AQ580R0 203 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 ZMAT1Q5H9K5 638 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 HABP4Q5JVS0 413 aaKnown RBP5.93□□□□□ -1.46
SCFD1-205ENST00000469043 NSMFQ6X4W1 530 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 FUKQ8N0W3 1084 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 NME8Q8N427 588 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCFD1-205ENST00000469043 ZNF503Q96F45 646 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 ST7Q9NRC1 585 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 GNL3LQ9NVN8 582 aaKnown RBP5.93□□□□□ -1.46
SCFD1-205ENST00000469043 TELO2Q9Y4R8 837 aa5.93□□□□□ -1.46
SCFD1-205ENST00000469043 TSPAN6O43657 245 aa5.92□□□□□ -1.46
SCFD1-205ENST00000469043 RAD17O75943 681 aa5.92□□□□□ -1.46
SCFD1-205ENST00000469043 LDHAP00338 332 aaKnown RBP5.92□□□□□ -1.46
SCFD1-205ENST00000469043 HDAC1Q13547 482 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-205ENST00000469043 TCEA2Q15560 299 aa5.92□□□□□ -1.46
SCFD1-205ENST00000469043 DDR2Q16832 855 aa5.92□□□□□ -1.46
SCFD1-205ENST00000469043 DALRD3Q5D0E6 543 aaKnown RBP5.92□□□□□ -1.46
SCFD1-205ENST00000469043 POLNQ7Z5Q5 900 aa5.92□□□□□ -1.46
SCFD1-205ENST00000469043 NLGN4XQ8N0W4 816 aa5.92□□□□□ -1.46
SCFD1-205ENST00000469043 PNISRQ8TF01 805 aaKnown RBP5.92□□□□□ -1.46
SCFD1-205ENST00000469043 FAM89AQ96GI7 184 aa5.92□□□□□ -1.46
SCFD1-205ENST00000469043 SCYL1Q96KG9 808 aa5.92□□□□□ -1.46
SCFD1-205ENST00000469043 MPHOSPH6Q99547 160 aaKnown RBP5.92□□□□□ -1.46
SCFD1-205ENST00000469043 ALG1Q9BT22 464 aa5.92□□□□□ -1.46
SCFD1-205ENST00000469043 PTPN22Q9Y2R2 807 aa5.92□□□□□ -1.46
SCFD1-205ENST00000469043 CCDC189A1A4V9 331 aa5.91□□□□□ -1.46
SCFD1-205ENST00000469043 ACOT7O00154 380 aa5.91□□□□□ -1.46
SCFD1-205ENST00000469043 ALDH1L1O75891 902 aa5.91□□□□□ -1.46
SCFD1-205ENST00000469043 ASMTLO95671 621 aa5.91□□□□□ -1.46
SCFD1-205ENST00000469043 KRT18P05783 430 aaKnown RBP5.91□□□□□ -1.46
SCFD1-205ENST00000469043 PABPC1P11940 636 aaKnown RBP5.91□□□□□ -1.46
SCFD1-205ENST00000469043 ACO1P21399 889 aaKnown RBP5.91□□□□□ -1.46
SCFD1-205ENST00000469043 MCM7P33993 719 aa5.91□□□□□ -1.46
SCFD1-205ENST00000469043 PURAQ00577 322 aaKnown RBP5.91□□□□□ -1.46
SCFD1-205ENST00000469043 DBPQ10586 325 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-205ENST00000469043 NFE2Q16621 373 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-205ENST00000469043 LSM12Q3MHD2 195 aaKnown RBP5.91□□□□□ -1.46
SCFD1-205ENST00000469043 BTBD8Q5XKL5 378 aa5.91□□□□□ -1.46
SCFD1-205ENST00000469043 STYK1Q6J9G0 422 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms