RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 SLC2A4RGQ9NR83 387 aa5.43□□□□□ -1.54
SSB-208ENST00000468600 RIC8BQ9NVN3 520 aa5.43□□□□□ -1.54
SSB-208ENST00000468600 SRPK3Q9UPE1 567 aa5.43□□□□□ -1.54
SSB-208ENST00000468600 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
SSB-208ENST00000468600 KRTAP29-1A8MX34 341 aaPredicted RBP5.42□□□□□ -1.54
SSB-208ENST00000468600 ADCY3O60266 1144 aa5.42□□□□□ -1.54
SSB-208ENST00000468600 PTPN1P18031 435 aaKnown RBP5.42□□□□□ -1.54
SSB-208ENST00000468600 BMP5P22003 454 aa5.42□□□□□ -1.54
SSB-208ENST00000468600 PCOLCEQ15113 449 aa5.42□□□□□ -1.54
SSB-208ENST00000468600 LARP4Q71RC2 724 aaKnown RBP eCLIP5.42□□□□□ -1.54
SSB-208ENST00000468600 OTOP2Q7RTS6 562 aa5.42□□□□□ -1.54
SSB-208ENST00000468600 RTKN2Q8IZC4 609 aa5.42□□□□□ -1.54
SSB-208ENST00000468600 WDR48Q8TAF3 677 aa5.42□□□□□ -1.54
SSB-208ENST00000468600 PTPRN2Q92932 1015 aa5.42□□□□□ -1.54
SSB-208ENST00000468600 IGSF5Q9NSI5 407 aa5.42□□□□□ -1.54
SSB-208ENST00000468600 FAM90A27PA6NNH2 459 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 ARVCFO00192 962 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 FOXN1O15353 648 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 PDE6AP16499 860 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 NAT1P18440 290 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 PTGS1P23219 599 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 ZC3H6P61129 1189 aaKnown RBP5.41□□□□□ -1.54
SSB-208ENST00000468600 IL13RA1P78552 427 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 RASGRF1Q13972 1273 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 EIF4HQ15056 248 aaKnown RBP5.41□□□□□ -1.54
SSB-208ENST00000468600 FIGNQ5HY92 759 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 ARHGAP36Q6ZRI8 547 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 SHCBP1Q8NEM2 672 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 CCDC113Q9H0I3 377 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 INCENPQ9NQS7 918 aa5.41□□□□□ -1.54
SSB-208ENST00000468600 CCDC9Q9Y3X0 531 aaKnown RBP5.41□□□□□ -1.54
SSB-208ENST00000468600 PDPK1O15530 556 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 SLC26A4O43511 780 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 AMY2AP04746 511 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 KRT4P19013 534 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 AMY2BP19961 511 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 MRE11P49959 708 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 KRTAP10-11P60412 298 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 HERVK_113P62684 666 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 FSTL1Q12841 308 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 RRP1BQ14684 758 aaKnown RBP5.4□□□□□ -1.54
SSB-208ENST00000468600 EP400NLQ6ZTU2 488 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 C16orf59Q7L2K0 433 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 FILIP1Q7Z7B0 1213 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 OR14K1Q8NGZ2 314 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 PCDH19Q8TAB3 1148 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 FBXW5Q969U6 566 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 TMEM176AQ96HP8 235 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 TRIM55Q9BYV6 548 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 GALNT8Q9NY28 637 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 CDC42EP3Q9UKI2 254 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 FAM184BQ9ULE4 1060 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 TRAF6Q9Y4K3 522 aa5.4□□□□□ -1.54
SSB-208ENST00000468600 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.39□□□□□ -1.55
SSB-208ENST00000468600 MAN2B1O00754 1011 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 GSTA4O15217 222 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 C6orf222P0C671 652 aaPredicted RBP5.39□□□□□ -1.55
SSB-208ENST00000468600 SUMO1P63165 101 aaKnown RBP5.39□□□□□ -1.55
SSB-208ENST00000468600 STILQ15468 1287 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 LONRF2Q1L5Z9 754 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 NBPF6Q5VWK0 638 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 LAIR1Q6GTX8 287 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 SPATC1Q76KD6 591 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 MTDHQ86UE4 582 aaKnown RBP5.39□□□□□ -1.55
SSB-208ENST00000468600 CKAP2LQ8IYA6 745 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 GPR135Q8IZ08 494 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 ANKRD35Q8N283 1001 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 ZBTB38Q8NAP3 1195 aaPredicted RBP5.39□□□□□ -1.55
SSB-208ENST00000468600 NBPF4Q96M43 638 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 MPHOSPH9Q99550 1183 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 ATP23Q9Y6H3 246 aa5.39□□□□□ -1.55
SSB-208ENST00000468600 TRBV23-1A0A0A0MS06 115 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 A0A0G2JNJ9 132 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 ZNF561-AS1K7EIQ3 104 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 CLASP2O75122 1294 aaKnown RBP5.38□□□□□ -1.55
SSB-208ENST00000468600 FBLP22087 321 aaKnown RBP5.38□□□□□ -1.55
SSB-208ENST00000468600 AOAHP28039 575 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 PTGS2P35354 604 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 GABREP78334 506 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 LACTBP83111 547 aaPredicted RBP5.38□□□□□ -1.55
SSB-208ENST00000468600 CCDC142Q17RM4 750 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 ZNF662Q6ZS27 426 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 GLCCI1Q86VQ1 547 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 WNK4Q96J92 1243 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 BTBD7Q9P203 1132 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 Q9UFV3 132 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 PCDHA8Q9Y5H6 950 aa5.38□□□□□ -1.55
SSB-208ENST00000468600 PMS2P1A4D2B8 440 aa5.37□□□□□ -1.55
SSB-208ENST00000468600 PRAMEF25A6NGN4 478 aa5.37□□□□□ -1.55
SSB-208ENST00000468600 C4BPAP04003 597 aaKnown RBP5.37□□□□□ -1.55
SSB-208ENST00000468600 COL10A1Q03692 680 aa5.37□□□□□ -1.55
SSB-208ENST00000468600 CNGB1Q14028 1251 aaPredicted RBP5.37□□□□□ -1.55
SSB-208ENST00000468600 CRY1Q16526 586 aa5.37□□□□□ -1.55
SSB-208ENST00000468600 MTERF2Q49AM1 385 aa5.37□□□□□ -1.55
SSB-208ENST00000468600 TRIM68Q6AZZ1 485 aa5.37□□□□□ -1.55
SSB-208ENST00000468600 Q6ZPA2 131 aa5.37□□□□□ -1.55
SSB-208ENST00000468600 OSTM1Q86WC4 334 aa5.37□□□□□ -1.55
SSB-208ENST00000468600 CDC6Q99741 560 aa5.37□□□□□ -1.55
SSB-208ENST00000468600 BTBD2Q9BX70 525 aa5.37□□□□□ -1.55
SSB-208ENST00000468600 CATSPERZQ9NTU4 200 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms