RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 AK2P54819 239 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 TMEM62Q0P6H9 643 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 NPY5RQ15761 445 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 FBXO22Q8NEZ5 403 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 RDM1Q8NG50 284 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 GDPD5Q8WTR4 605 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 AIFM3Q96NN9 605 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 PHF20Q9BVI0 1012 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 AGO3Q9H9G7 860 aaKnown RBP21.56■■□□□ 1.04
COL7A1-207ENST00000467985 SUGCTQ9HAC7 445 aa21.56■■□□□ 1.04
COL7A1-207ENST00000467985 PAK2Q13177 524 aa21.55■■□□□ 1.04
COL7A1-207ENST00000467985 SKIV2LQ15477 1246 aaKnown RBP21.55■■□□□ 1.04
COL7A1-207ENST00000467985 ODR4Q5SWX8 454 aa21.55■■□□□ 1.04
COL7A1-207ENST00000467985 KIAA0319LQ8IZA0 1049 aa21.55■■□□□ 1.04
COL7A1-207ENST00000467985 MBOAT7Q96N66 472 aa21.55■■□□□ 1.04
COL7A1-207ENST00000467985 ASB2Q96Q27 587 aa21.55■■□□□ 1.04
COL7A1-207ENST00000467985 NRBP2Q9NSY0 501 aa21.55■■□□□ 1.04
COL7A1-207ENST00000467985 CCDC194A0A1B0GVG4 234 aa21.54■■□□□ 1.04
COL7A1-207ENST00000467985 MAGEB2O15479 319 aa21.54■■□□□ 1.04
COL7A1-207ENST00000467985 C22orf31O95567 290 aa21.54■■□□□ 1.04
COL7A1-207ENST00000467985 AAK1Q2M2I8 961 aa21.54■■□□□ 1.04
COL7A1-207ENST00000467985 ZNF710Q8N1W2 664 aa21.54■■□□□ 1.04
COL7A1-207ENST00000467985 C17orf80Q9BSJ5 609 aa21.54■■□□□ 1.04
COL7A1-207ENST00000467985 PADI3Q9ULW8 664 aa21.54■■□□□ 1.04
COL7A1-207ENST00000467985 KCNJ14Q9UNX9 436 aa21.54■■□□□ 1.04
COL7A1-207ENST00000467985 COG5Q9UP83 839 aa21.54■■□□□ 1.04
COL7A1-207ENST00000467985 RBAK-RBAKDNI3L0D1 243 aa21.53■■□□□ 1.04
COL7A1-207ENST00000467985 PSMD10O75832 226 aa21.53■■□□□ 1.04
COL7A1-207ENST00000467985 TDP2O95551 362 aa21.53■■□□□ 1.04
COL7A1-207ENST00000467985 EPC2Q52LR7 807 aa21.53■■□□□ 1.04
COL7A1-207ENST00000467985 KRT40Q6A162 431 aa21.53■■□□□ 1.04
COL7A1-207ENST00000467985 IL27Q8NEV9 243 aa21.53■■□□□ 1.04
COL7A1-207ENST00000467985 UNC45AQ9H3U1 944 aa21.53■■□□□ 1.04
COL7A1-207ENST00000467985 RWDD3Q9Y3V2 267 aa21.53■■□□□ 1.04
COL7A1-207ENST00000467985 TTC3P53804 2025 aa21.53■■□□□ 1.04
COL7A1-207ENST00000467985 WDR81Q562E7 1941 aa21.53■■□□□ 1.04
COL7A1-207ENST00000467985 NCOR1O75376 2440 aa21.53■■□□□ 1.04
COL7A1-207ENST00000467985 CHMP2AO43633 222 aa21.52■■□□□ 1.04
COL7A1-207ENST00000467985 OATP04181 439 aa21.52■■□□□ 1.04
COL7A1-207ENST00000467985 GCFC2P16383 781 aaKnown RBP21.52■■□□□ 1.04
COL7A1-207ENST00000467985 TMOD1P28289 359 aa21.52■■□□□ 1.04
COL7A1-207ENST00000467985 INF2Q27J81 1249 aa21.52■■□□□ 1.04
COL7A1-207ENST00000467985 FIBCD1Q8N539 461 aa21.52■■□□□ 1.04
COL7A1-207ENST00000467985 METTL13Q8N6R0 699 aa21.52■■□□□ 1.04
COL7A1-207ENST00000467985 NAP1L4Q99733 375 aaKnown RBP21.52■■□□□ 1.04
COL7A1-207ENST00000467985 RNF216Q9NWF9 866 aaPredicted RBP21.52■■□□□ 1.04
COL7A1-207ENST00000467985 ORC3Q9UBD5 711 aaPredicted RBP21.52■■□□□ 1.04
COL7A1-207ENST00000467985 DDX25Q9UHL0 483 aaKnown RBP21.52■■□□□ 1.04
COL7A1-207ENST00000467985 LOXHD1Q8IVV2 1947 aa21.52■■□□□ 1.04
COL7A1-207ENST00000467985 EVPLQ92817 2033 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 CTDNEP1O95476 244 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 STAG3L1P0CL83 205 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 NEK4P51957 841 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 CRYBB1P53674 252 aaPredicted RBP21.51■■□□□ 1.03
COL7A1-207ENST00000467985 PRKCEQ02156 737 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 PTPROQ16827 1216 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 TRMT1LQ7Z2T5 733 aaKnown RBP21.51■■□□□ 1.03
COL7A1-207ENST00000467985 MIER3Q7Z3K6 550 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 NEK8Q86SG6 692 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 NPAS4Q8IUM7 802 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 TMEM192Q8IY95 271 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 ETNPPLQ8TBG4 499 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 GTF3C6Q969F1 213 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 GINS2Q9Y248 185 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 RALGAPA2Q2PPJ7 1873 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 ADGRA3Q8IWK6 1321 aa21.51■■□□□ 1.03
COL7A1-207ENST00000467985 H3BNC9 293 aa21.5■■□□□ 1.03
COL7A1-207ENST00000467985 ZNF862O60290 1169 aa21.5■■□□□ 1.03
COL7A1-207ENST00000467985 RPS6KA5O75582 802 aa21.5■■□□□ 1.03
COL7A1-207ENST00000467985 ME3Q16798 604 aa21.5■■□□□ 1.03
COL7A1-207ENST00000467985 LETM2Q2VYF4 491 aa21.5■■□□□ 1.03
COL7A1-207ENST00000467985 PPP4R3AQ6IN85 833 aa21.5■■□□□ 1.03
COL7A1-207ENST00000467985 LINC01599Q8WXQ3 324 aa21.5■■□□□ 1.03
COL7A1-207ENST00000467985 FAM20AQ96MK3 541 aa21.5■■□□□ 1.03
COL7A1-207ENST00000467985 MAP7D2Q96T17 732 aa21.5■■□□□ 1.03
COL7A1-207ENST00000467985 RC3H2Q9HBD1 1191 aaKnown RBP21.5■■□□□ 1.03
COL7A1-207ENST00000467985 BRMS1Q9HCU9 246 aa21.5■■□□□ 1.03
COL7A1-207ENST00000467985 NLRC5Q86WI3 1866 aa21.49■■□□□ 1.03
COL7A1-207ENST00000467985 GPR182O15218 404 aa21.49■■□□□ 1.03
COL7A1-207ENST00000467985 DGKIO75912 1065 aa21.49■■□□□ 1.03
COL7A1-207ENST00000467985 NFX1Q12986 1120 aaKnown RBP21.49■■□□□ 1.03
COL7A1-207ENST00000467985 EFCAB12Q6NXP0 572 aa21.49■■□□□ 1.03
COL7A1-207ENST00000467985 B3GNT9Q6UX72 402 aa21.49■■□□□ 1.03
COL7A1-207ENST00000467985 RTN4RL1Q86UN2 441 aaPredicted RBP21.49■■□□□ 1.03
COL7A1-207ENST00000467985 HLA-CQ95604 372 aa21.49■■□□□ 1.03
COL7A1-207ENST00000467985 ZNF689Q96CS4 500 aaPredicted RBP21.49■■□□□ 1.03
COL7A1-207ENST00000467985 MRPL38Q96DV4 380 aaKnown RBP21.49■■□□□ 1.03
COL7A1-207ENST00000467985 NOC2LQ9Y3T9 749 aaKnown RBP21.49■■□□□ 1.03
COL7A1-207ENST00000467985 RB1P06400 928 aa21.48■■□□□ 1.03
COL7A1-207ENST00000467985 GPM6BQ13491 265 aa21.48■■□□□ 1.03
COL7A1-207ENST00000467985 BTG3Q14201 252 aaPredicted RBP21.48■■□□□ 1.03
COL7A1-207ENST00000467985 UGCGQ16739 394 aa21.48■■□□□ 1.03
COL7A1-207ENST00000467985 KIZQ2M2Z5 673 aa21.48■■□□□ 1.03
COL7A1-207ENST00000467985 TMEM266Q2M3C6 531 aa21.48■■□□□ 1.03
COL7A1-207ENST00000467985 XKR3Q5GH77 459 aa21.48■■□□□ 1.03
COL7A1-207ENST00000467985 CRIPAKQ8N1N5 446 aa21.48■■□□□ 1.03
COL7A1-207ENST00000467985 NECAB1Q8N987 351 aa21.48■■□□□ 1.03
COL7A1-207ENST00000467985 CLP1Q92989 425 aaKnown RBP21.48■■□□□ 1.03
COL7A1-207ENST00000467985 GJA10Q969M2 543 aa21.48■■□□□ 1.03
COL7A1-207ENST00000467985 CDHR5Q9HBB8 845 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms