RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 BCAR1P56945 870 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 SCAND1P57086 179 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 PFKPQ01813 784 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 PRAMEF18Q5VWM3 479 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 SLFN12LQ6IEE8 588 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 KIAA1841Q6NSI8 718 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 PGM2L1Q6PCE3 622 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 TTLL7Q6ZT98 887 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 LDHDQ86WU2 507 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 FMNL3Q8IVF7 1028 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 DTX3Q8N9I9 347 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 WDR48Q8TAF3 677 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 RPGRQ92834 1020 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 FERMT2Q96AC1 680 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 HOOK2Q96ED9 719 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 LIN37Q96GY3 246 aaPredicted RBP6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 RAX2Q96IS3 184 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 CCDC136Q96JN2 1154 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 BTBD2Q9BX70 525 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 CDH19Q9H159 772 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 BCAS3Q9H6U6 928 aa6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 GEMIN8Q9NWZ8 242 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-211ENST00000467707 RFPL1O75677 317 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 PRPF6O94906 941 aaKnown RBP6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 MPIG6BO95866 241 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 CHGBP05060 677 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 C8BP07358 591 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 MANFP55145 182 aaKnown RBP6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 SLC6A3Q01959 620 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 ADCY2Q08462 1091 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 PDCD1Q15116 288 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 TMEM240Q5SV17 173 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 DPP8Q6V1X1 898 aaPredicted RBP6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 CXXC5Q7LFL8 322 aaKnown RBP6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 KANSL1Q7Z3B3 1105 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 PNMA8AQ86V59 439 aaPredicted RBP6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 PROSER1Q86XN7 944 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 POFUT1Q9H488 388 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 NSUN3Q9H649 340 aaKnown RBP6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 LUC7LQ9NQ29 371 aaKnown RBP6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 UCKL1Q9NWZ5 548 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 ZIM2Q9NZV7 527 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 MBD1Q9UIS9 605 aaPredicted RBP6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 PCDHA5Q9Y5H7 936 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 NUMBLQ9Y6R0 609 aa6.72□□□□□ -1.33
GAPVD1-211ENST00000467707 KLHL33A6NCF5 533 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 FZD9O00144 591 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 N4BP3O15049 544 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 TSPAN6O43657 245 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 ABLIM3O94929 683 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 MT-CO1P00395 513 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 VCAM1P19320 739 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 APEX1P27695 318 aaKnown RBP6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 ECE1P42892 770 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 MRPS9P82933 396 aaKnown RBP6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 PRAMEF9Q5VWM5 478 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 TMEM132EQ6IEE7 984 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 MZB1Q8WU39 189 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 CLIC6Q96NY7 704 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 MYL10Q9BUA6 226 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 MS4A5Q9H3V2 200 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 CNTD2Q9H8S5 307 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 SLC39A2Q9NP94 309 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 CCM2LQ9NUG4 571 aaPredicted RBP6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 ARHGAP20Q9P2F6 1191 aa6.71□□□□□ -1.34
GAPVD1-211ENST00000467707 CARMIL2Q6F5E8 1435 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 MYOCOSA0A1B0GUC4 107 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 NFIBO00712 420 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 IGFBP6P24592 240 aaPredicted RBP6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 MC4RP32245 332 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 MAP3K12Q12852 859 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 MYBPC3Q14896 1274 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 UGT8Q16880 541 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 SKIDA1Q1XH10 827 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 CCDC178Q5BJE1 867 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 LIPIQ6XZB0 460 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 CHPFQ8IZ52 775 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 FAM26EQ8N5C1 309 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 TTLL6Q8N841 843 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 FBXO15Q8NCQ5 510 aaPredicted RBP6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 SMARCC2Q8TAQ2 1214 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 C8orf48Q96LL4 319 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 DIRC2Q96SL1 478 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 NUP88Q99567 741 aaPredicted RBP6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 OR10A5Q9H207 317 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 DNAJC28Q9NX36 388 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 ZNF180Q9UJW8 692 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 LUC7L2Q9Y383 392 aaKnown RBP6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 PPP2R3BQ9Y5P8 575 aa6.7□□□□□ -1.34
GAPVD1-211ENST00000467707 LRRC10BA6NIK2 292 aa6.69□□□□□ -1.34
GAPVD1-211ENST00000467707 CT47B1P0C2W7 299 aaPredicted RBP6.69□□□□□ -1.34
GAPVD1-211ENST00000467707 GPR15P49685 360 aa6.69□□□□□ -1.34
GAPVD1-211ENST00000467707 CDR1P51861 262 aa6.69□□□□□ -1.34
GAPVD1-211ENST00000467707 SLC5A3P53794 718 aa6.69□□□□□ -1.34
GAPVD1-211ENST00000467707 NFATC3Q12968 1075 aa6.69□□□□□ -1.34
GAPVD1-211ENST00000467707 STILQ15468 1287 aa6.69□□□□□ -1.34
GAPVD1-211ENST00000467707 NXNQ6DKJ4 435 aa6.69□□□□□ -1.34
GAPVD1-211ENST00000467707 TMC5Q6UXY8 1006 aa6.69□□□□□ -1.34
GAPVD1-211ENST00000467707 PRR23BQ6ZRT6 265 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms