RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 DYDC2Q96IM9 177 aa29.16■■■□□ 2.26
PDCD4-205ENST00000467574 NRBP2Q9NSY0 501 aa29.16■■■□□ 2.26
PDCD4-205ENST00000467574 CXXC1Q9P0U4 656 aaPredicted RBP29.16■■■□□ 2.26
PDCD4-205ENST00000467574 FGBP02675 491 aa29.15■■■□□ 2.26
PDCD4-205ENST00000467574 PTGDRQ13258 359 aa29.15■■■□□ 2.26
PDCD4-205ENST00000467574 ANO5Q75V66 913 aa29.15■■■□□ 2.26
PDCD4-205ENST00000467574 OTOP2Q7RTS6 562 aa29.15■■■□□ 2.26
PDCD4-205ENST00000467574 BRAPQ7Z569 592 aa29.15■■■□□ 2.26
PDCD4-205ENST00000467574 FERMT3Q86UX7 667 aa29.15■■■□□ 2.26
PDCD4-205ENST00000467574 LINC01465Q8N7H1 131 aa29.15■■■□□ 2.26
PDCD4-205ENST00000467574 HSD17B14Q9BPX1 270 aa29.15■■■□□ 2.26
PDCD4-205ENST00000467574 EIF2AK1Q9BQI3 630 aaKnown RBP29.15■■■□□ 2.26
PDCD4-205ENST00000467574 SEPT9Q9UHD8 586 aaPredicted RBP29.15■■■□□ 2.26
PDCD4-205ENST00000467574 RPLP2P05387 115 aaKnown RBP29.14■■■□□ 2.26
PDCD4-205ENST00000467574 CYP4A11Q02928 519 aa29.14■■■□□ 2.26
PDCD4-205ENST00000467574 C4orf19Q8IY42 314 aa29.14■■■□□ 2.26
PDCD4-205ENST00000467574 KIAA0319LQ8IZA0 1049 aa29.14■■■□□ 2.26
PDCD4-205ENST00000467574 MTMR6Q9Y217 621 aa29.14■■■□□ 2.26
PDCD4-205ENST00000467574 SLITRK3O94933 977 aa29.13■■■□□ 2.25
PDCD4-205ENST00000467574 TECP42680 631 aa29.13■■■□□ 2.25
PDCD4-205ENST00000467574 MRPS6P82932 125 aaKnown RBP29.13■■■□□ 2.25
PDCD4-205ENST00000467574 RESTQ13127 1097 aa29.13■■■□□ 2.25
PDCD4-205ENST00000467574 CTTNQ14247 550 aaKnown RBP29.13■■■□□ 2.25
PDCD4-205ENST00000467574 RSPH3Q86UC2 560 aa29.13■■■□□ 2.25
PDCD4-205ENST00000467574 CHD9Q3L8U1 2897 aa29.12■■■□□ 2.25
PDCD4-205ENST00000467574 FXR2P51116 673 aaKnown RBP eCLIP29.12■■■□□ 2.25
PDCD4-205ENST00000467574 PLA2G4FQ68DD2 849 aa29.12■■■□□ 2.25
PDCD4-205ENST00000467574 NEK9Q8TD19 979 aa29.12■■■□□ 2.25
PDCD4-205ENST00000467574 SH2D3AQ9BRG2 576 aa29.12■■■□□ 2.25
PDCD4-205ENST00000467574 FTOQ9C0B1 505 aaKnown RBP eCLIP29.12■■■□□ 2.25
PDCD4-205ENST00000467574 ZSWIM4Q9H7M6 989 aa29.12■■■□□ 2.25
PDCD4-205ENST00000467574 CDY2AQ9Y6F7 541 aa29.12■■■□□ 2.25
PDCD4-205ENST00000467574 LAD1O00515 517 aa29.11■■■□□ 2.25
PDCD4-205ENST00000467574 MAGEB2O15479 319 aa29.11■■■□□ 2.25
PDCD4-205ENST00000467574 DKC1O60832 514 aaKnown RBP eCLIP29.11■■■□□ 2.25
PDCD4-205ENST00000467574 LYPLA2O95372 231 aa29.11■■■□□ 2.25
PDCD4-205ENST00000467574 ATP2C1P98194 919 aaPredicted RBP29.11■■■□□ 2.25
PDCD4-205ENST00000467574 IL17AQ16552 155 aa29.11■■■□□ 2.25
PDCD4-205ENST00000467574 MTERF2Q49AM1 385 aa29.11■■■□□ 2.25
PDCD4-205ENST00000467574 PLEKHG4Q58EX7 1191 aa29.11■■■□□ 2.25
PDCD4-205ENST00000467574 FAM109BQ6ICB4 259 aaPredicted RBP29.11■■■□□ 2.25
PDCD4-205ENST00000467574 CNKSR3Q6P9H4 555 aa29.11■■■□□ 2.25
PDCD4-205ENST00000467574 LRCH3Q96II8 777 aa29.11■■■□□ 2.25
PDCD4-205ENST00000467574 DDX11L8A8MPP1 907 aa29.1■■■□□ 2.25
PDCD4-205ENST00000467574 STX6O43752 255 aa29.1■■■□□ 2.25
PDCD4-205ENST00000467574 SPATA31C1P0DKV0 1188 aa29.1■■■□□ 2.25
PDCD4-205ENST00000467574 PRPHP41219 470 aa29.1■■■□□ 2.25
PDCD4-205ENST00000467574 CLCN3P51790 818 aa29.1■■■□□ 2.25
PDCD4-205ENST00000467574 TMEM62Q0P6H9 643 aa29.1■■■□□ 2.25
PDCD4-205ENST00000467574 MKRN4PQ13434 485 aaPredicted RBP29.1■■■□□ 2.25
PDCD4-205ENST00000467574 NME8Q8N427 588 aa29.1■■■□□ 2.25
PDCD4-205ENST00000467574 IGKV6-21A0A0C4DH24 114 aa29.09■■■□□ 2.25
PDCD4-205ENST00000467574 ZBTB39O15060 712 aa29.09■■■□□ 2.25
PDCD4-205ENST00000467574 YWHABP31946 246 aaKnown RBP29.09■■■□□ 2.25
PDCD4-205ENST00000467574 NPEPPSP55786 919 aa29.09■■■□□ 2.25
PDCD4-205ENST00000467574 TBC1D8BQ0IIM8 1120 aa29.09■■■□□ 2.25
PDCD4-205ENST00000467574 TPH2Q8IWU9 490 aa29.09■■■□□ 2.25
PDCD4-205ENST00000467574 LRRC71Q8N4P6 559 aa29.09■■■□□ 2.25
PDCD4-205ENST00000467574 IGSF22Q8N9C0 903 aa29.09■■■□□ 2.25
PDCD4-205ENST00000467574 ZNF579Q8NAF0 562 aaKnown RBP29.09■■■□□ 2.25
PDCD4-205ENST00000467574 CYP26B1Q9NR63 512 aa29.09■■■□□ 2.25
PDCD4-205ENST00000467574 TRPV2Q9Y5S1 764 aa29.09■■■□□ 2.25
PDCD4-205ENST00000467574 KDM3AQ9Y4C1 1321 aa29.09■■■□□ 2.25
PDCD4-205ENST00000467574 MED24O75448 989 aa29.08■■■□□ 2.25
PDCD4-205ENST00000467574 ACTN1P12814 892 aa29.08■■■□□ 2.25
PDCD4-205ENST00000467574 LPIN1Q14693 890 aa29.08■■■□□ 2.25
PDCD4-205ENST00000467574 TMEM266Q2M3C6 531 aa29.08■■■□□ 2.25
PDCD4-205ENST00000467574 FBXO47Q5MNV8 452 aa29.08■■■□□ 2.25
PDCD4-205ENST00000467574 IER5Q5VY09 327 aa29.08■■■□□ 2.25
PDCD4-205ENST00000467574 EFCAB12Q6NXP0 572 aa29.08■■■□□ 2.25
PDCD4-205ENST00000467574 METTL13Q8N6R0 699 aa29.08■■■□□ 2.25
PDCD4-205ENST00000467574 DBF4BQ8NFT6 615 aa29.08■■■□□ 2.25
PDCD4-205ENST00000467574 MTIF3Q9H2K0 278 aaKnown RBP29.08■■■□□ 2.25
PDCD4-205ENST00000467574 BAIAP3O94812 1187 aa29.07■■■□□ 2.24
PDCD4-205ENST00000467574 GHRP10912 638 aa29.07■■■□□ 2.24
PDCD4-205ENST00000467574 DRP2Q13474 957 aa29.07■■■□□ 2.24
PDCD4-205ENST00000467574 POLR3CQ9BUI4 534 aaPredicted RBP29.07■■■□□ 2.24
PDCD4-205ENST00000467574 CELF4Q9BZC1 486 aaKnown RBP29.07■■■□□ 2.24
PDCD4-205ENST00000467574 CDH23Q9H251 3354 aa29.07■■■□□ 2.24
PDCD4-205ENST00000467574 MAFO75444 373 aaPredicted RBP29.06■■■□□ 2.24
PDCD4-205ENST00000467574 VTNP04004 478 aa29.06■■■□□ 2.24
PDCD4-205ENST00000467574 HSP90AA1P07900 732 aaKnown RBP29.06■■■□□ 2.24
PDCD4-205ENST00000467574 CATSPER3Q86XQ3 398 aa29.06■■■□□ 2.24
PDCD4-205ENST00000467574 TUFT1Q9NNX1 390 aa29.06■■■□□ 2.24
PDCD4-205ENST00000467574 CHD7Q9P2D1 2997 aa29.06■■■□□ 2.24
PDCD4-205ENST00000467574 ZBBXA8MT70 800 aa29.05■■■□□ 2.24
PDCD4-205ENST00000467574 SMAD3P84022 425 aaKnown RBP29.05■■■□□ 2.24
PDCD4-205ENST00000467574 PDIA5Q14554 519 aa29.05■■■□□ 2.24
PDCD4-205ENST00000467574 CEP170P1Q96L14 293 aa29.05■■■□□ 2.24
PDCD4-205ENST00000467574 DHX33Q9H6R0 707 aaKnown RBP29.05■■■□□ 2.24
PDCD4-205ENST00000467574 AGO3Q9H9G7 860 aaKnown RBP29.05■■■□□ 2.24
PDCD4-205ENST00000467574 CDHR5Q9HBB8 845 aa29.05■■■□□ 2.24
PDCD4-205ENST00000467574 PPME1Q9Y570 386 aa29.05■■■□□ 2.24
PDCD4-205ENST00000467574 SLC4A7Q9Y6M7 1214 aa29.05■■■□□ 2.24
PDCD4-205ENST00000467574 GRXCR1A8MXD5 290 aa29.04■■■□□ 2.24
PDCD4-205ENST00000467574 M0QZ92 97 aa29.04■■■□□ 2.24
PDCD4-205ENST00000467574 GPR32O75388 356 aa29.04■■■□□ 2.24
PDCD4-205ENST00000467574 RPA1P27694 616 aa29.04■■■□□ 2.24
PDCD4-205ENST00000467574 WDR5P61964 334 aaKnown RBP29.04■■■□□ 2.24
PDCD4-205ENST00000467574 FAM173BQ6P4H8 233 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms