RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ETV4P43268 484 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 EFEMP1Q12805 493 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 STILQ15468 1287 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 SURF1Q15526 300 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 CXXC5Q7LFL8 322 aaKnown RBP5.42□□□□□ -1.54
VPS50-209ENST00000467326 KIAA0907Q7Z7F0 614 aaPredicted RBP5.42□□□□□ -1.54
VPS50-209ENST00000467326 DHX37Q8IY37 1157 aaKnown RBP5.42□□□□□ -1.54
VPS50-209ENST00000467326 KIAA1958Q8N8K9 716 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 WDR48Q8TAF3 677 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 ERCC4Q92889 916 aaPredicted RBP5.42□□□□□ -1.54
VPS50-209ENST00000467326 AJUBAQ96IF1 538 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 GPR20Q99678 358 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 AMNQ9BXJ7 453 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 KATNBL1Q9H079 304 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 B4GALT6Q9UBX8 382 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 FBXO10Q9UK96 956 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 TMA7Q9Y2S6 64 aaKnown RBP5.42□□□□□ -1.54
VPS50-209ENST00000467326 ZDHHC9Q9Y397 364 aa5.42□□□□□ -1.54
VPS50-209ENST00000467326 K7ESM1 405 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 DVL2O14641 736 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 HMGCRP04035 888 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 NEK4P51957 841 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 TOP3AQ13472 1001 aaPredicted RBP5.41□□□□□ -1.54
VPS50-209ENST00000467326 ZNF174Q15697 407 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 ZNF568Q3ZCX4 644 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 TBC1D10BQ4KMP7 808 aaPredicted RBP5.41□□□□□ -1.54
VPS50-209ENST00000467326 KANK2Q63ZY3 851 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 CNNM4Q6P4Q7 775 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 OTOP2Q7RTS6 562 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 RTN4RL1Q86UN2 441 aaPredicted RBP5.41□□□□□ -1.54
VPS50-209ENST00000467326 PPM1KQ8N3J5 372 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 CALML6Q8TD86 181 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 PUS7Q96PZ0 661 aaKnown RBP5.41□□□□□ -1.54
VPS50-209ENST00000467326 ORAI3Q9BRQ5 295 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 ACSS2Q9NR19 701 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 ZNF536O15090 1300 aa5.41□□□□□ -1.54
VPS50-209ENST00000467326 FAM83GA6ND36 823 aa5.4□□□□□ -1.54
VPS50-209ENST00000467326 GAS7O60861 476 aa5.4□□□□□ -1.54
VPS50-209ENST00000467326 ZNF888P0CJ79 500 aaPredicted RBP5.4□□□□□ -1.54
VPS50-209ENST00000467326 POU3F2P20265 443 aaPredicted RBP5.4□□□□□ -1.54
VPS50-209ENST00000467326 ALDH6A1Q02252 535 aaKnown RBP5.4□□□□□ -1.54
VPS50-209ENST00000467326 USP10Q14694 798 aaKnown RBP5.4□□□□□ -1.54
VPS50-209ENST00000467326 DALRD3Q5D0E6 543 aaKnown RBP5.4□□□□□ -1.54
VPS50-209ENST00000467326 TAF7LQ5H9L4 462 aa5.4□□□□□ -1.54
VPS50-209ENST00000467326 CREB3L3Q68CJ9 461 aa5.4□□□□□ -1.54
VPS50-209ENST00000467326 ARHGEF18Q6ZSZ5 1173 aa5.4□□□□□ -1.54
VPS50-209ENST00000467326 E2F7Q96AV8 911 aa5.4□□□□□ -1.54
VPS50-209ENST00000467326 FOXRED1Q96CU9 486 aaPredicted RBP5.4□□□□□ -1.54
VPS50-209ENST00000467326 FOXB1Q99853 325 aa5.4□□□□□ -1.54
VPS50-209ENST00000467326 TARS2Q9BW92 718 aaKnown RBP5.4□□□□□ -1.54
VPS50-209ENST00000467326 CARD11Q9BXL7 1154 aa5.4□□□□□ -1.54
VPS50-209ENST00000467326 ZKSCAN5Q9Y2L8 839 aa5.4□□□□□ -1.54
VPS50-209ENST00000467326 ZNF891A8MT65 544 aaPredicted RBP5.39□□□□□ -1.55
VPS50-209ENST00000467326 GOLGA6L22H0YM25 854 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 B4GALT4O60513 344 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 PRLP01236 227 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 CYP17A1P05093 508 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 ITGB3P05106 788 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 APEX1P27695 318 aaKnown RBP5.39□□□□□ -1.55
VPS50-209ENST00000467326 KCNQ1P51787 676 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 EPHB4P54760 987 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 CD83Q01151 205 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 DSG1Q02413 1049 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 KRTAP1-1Q07627 177 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 PUM1Q14671 1186 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS50-209ENST00000467326 PLEKHG4Q58EX7 1191 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 GRAMD4Q6IC98 578 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 GIMAP6Q6P9H5 292 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 KIF18BQ86Y91 864 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 ZDHHC5Q9C0B5 715 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 JADE2Q9NQC1 790 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 PTPN22Q9Y2R2 807 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 SLC4A7Q9Y6M7 1214 aa5.39□□□□□ -1.55
VPS50-209ENST00000467326 UBA6A0AVT1 1052 aaPredicted RBP5.38□□□□□ -1.55
VPS50-209ENST00000467326 SUV39H1O43463 412 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 MAFO75444 373 aaPredicted RBP5.38□□□□□ -1.55
VPS50-209ENST00000467326 CNOT4O95628 575 aaKnown RBP5.38□□□□□ -1.55
VPS50-209ENST00000467326 F2P00734 622 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 INSRRP14616 1297 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 SLC9A1P19634 815 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 PTX3P26022 381 aaPredicted RBP5.38□□□□□ -1.55
VPS50-209ENST00000467326 RRADP55042 308 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 PPP2CBP62714 309 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 PPP2CAP67775 309 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 SLC6A3Q01959 620 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 ROM1Q03395 351 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 MAP3K12Q12852 859 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 MOGSQ13724 837 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 EPHA7Q15375 998 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 ZMAT1Q5H9K5 638 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 TMEM200BQ69YZ2 307 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 ESRP1Q6NXG1 681 aaKnown RBP5.38□□□□□ -1.55
VPS50-209ENST00000467326 GLB1LQ6UWU2 654 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 KIAA1683Q9H0B3 1180 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 MEGF9Q9H1U4 602 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS50-209ENST00000467326 OXSMQ9NWU1 459 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 SPO11Q9Y5K1 396 aa5.38□□□□□ -1.55
VPS50-209ENST00000467326 A0A0G2JNJ9 132 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms