RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 SALL4Q9UJQ4 1053 aa12.56□□□□□ -0.4
HPS1-208ENST00000467246 SSU72P8A0A1W2PR75 194 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 DHX15O43143 795 aaKnown RBP12.55□□□□□ -0.4
HPS1-208ENST00000467246 SASH3O75995 380 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 AFPP02771 609 aaKnown RBP12.55□□□□□ -0.4
HPS1-208ENST00000467246 RPS12P25398 132 aaKnown RBP12.55□□□□□ -0.4
HPS1-208ENST00000467246 ITGB3BPQ13352 177 aaPredicted RBP12.55□□□□□ -0.4
HPS1-208ENST00000467246 TCERG1LQ5VWI1 586 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 ARHGAP27Q6ZUM4 889 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 FAM133AQ8N9E0 248 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 SYN2Q92777 582 aaPredicted RBP12.55□□□□□ -0.4
HPS1-208ENST00000467246 DRC1Q96MC2 740 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 TAAR1Q96RJ0 339 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 FRMPD4Q14CM0 1322 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 FER1L6Q2WGJ9 1857 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 RBBP6Q7Z6E9 1792 aaKnown RBP12.55□□□□□ -0.4
HPS1-208ENST00000467246 TBC1D8O95759 1140 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 SERPING1P05155 500 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 EIF2AK2P19525 551 aaKnown RBP12.55□□□□□ -0.4
HPS1-208ENST00000467246 RPL13P26373 211 aaKnown RBP12.55□□□□□ -0.4
HPS1-208ENST00000467246 RPS6P62753 249 aaKnown RBP12.55□□□□□ -0.4
HPS1-208ENST00000467246 SPP2Q13103 211 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 TKFCQ3LXA3 575 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 ZNF720Q7Z2F6 126 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 MCF2L2Q86YR7 1114 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 WNK4Q96J92 1243 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 NUCKS1Q9H1E3 243 aaKnown RBP12.55□□□□□ -0.4
HPS1-208ENST00000467246 RPAP3Q9H6T3 665 aaPredicted RBP12.55□□□□□ -0.4
HPS1-208ENST00000467246 JADE2Q9NQC1 790 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 ATAD5Q96QE3 1844 aa12.55□□□□□ -0.4
HPS1-208ENST00000467246 EIF3DO15371 548 aaKnown RBP eCLIP12.54□□□□□ -0.4
HPS1-208ENST00000467246 BCRP11274 1271 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 MUTP22033 750 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 PON1P27169 355 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 PLA2G4AP47712 749 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 ZNF131P52739 623 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 ODR4Q5SWX8 454 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 MAEAQ7L5Y9 396 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 MIER3Q7Z3K6 550 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 FAM178BQ8IXR5 827 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 MSANTD4Q8NCY6 345 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 ZKSCAN4Q969J2 545 aaPredicted RBP12.54□□□□□ -0.4
HPS1-208ENST00000467246 SLC35C1Q96A29 364 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 ARFGAP3Q9NP61 516 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 PPP1R9AQ9ULJ8 1098 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 EPB41P11171 864 aaKnown RBP12.54□□□□□ -0.4
HPS1-208ENST00000467246 EXOC3L4Q17RC7 722 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 DAW1Q8N136 415 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 TRIM58Q8NG06 486 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 BORCS6Q96GS4 357 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 SH2D3AQ9BRG2 576 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 AGO4Q9HCK5 861 aaKnown RBP12.54□□□□□ -0.4
HPS1-208ENST00000467246 UBIAD1Q9Y5Z9 338 aa12.54□□□□□ -0.4
HPS1-208ENST00000467246 ANO9A1A5B4 782 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 CCDC151A5D8V7 595 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 ARHGEF35A5YM69 484 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 PDE2AO00408 941 aaPredicted RBP12.53□□□□□ -0.4
HPS1-208ENST00000467246 PJA2O43164 708 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 TACC1O75410 805 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 UCHL3P15374 230 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 CAPN2P17655 700 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 GHRHRQ02643 423 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 MAPK7Q13164 816 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 PCNX4Q63HM2 1172 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 TRMT1LQ7Z2T5 733 aaKnown RBP12.53□□□□□ -0.4
HPS1-208ENST00000467246 METTL14Q9HCE5 456 aaKnown RBP12.53□□□□□ -0.4
HPS1-208ENST00000467246 AIPL1Q9NZN9 384 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 ADAMTS1Q9UHI8 967 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 RAB21Q9UL25 225 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 SAMM50Q9Y512 469 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 A0A087X0T9 212 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 RBAK-RBAKDNI3L0D1 243 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 SLC16A3O15427 465 aaKnown RBP12.53□□□□□ -0.4
HPS1-208ENST00000467246 BUB1O43683 1085 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 HIP1RO75146 1068 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 FAM228BP0C875 321 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 KLHL30Q0D2K2 578 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 MTMR1Q13613 665 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 PLS1Q14651 629 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 KLHDC7AQ5VTJ3 777 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 PADI6Q6TGC4 694 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 ATG4CQ96DT6 458 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.53□□□□□ -0.4
HPS1-208ENST00000467246 MTFR1LQ9H019 292 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
HPS1-208ENST00000467246 ODF2LQ9ULJ1 636 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 JRKLQ9Y4A0 524 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 RIPK3Q9Y572 518 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 ZHX2Q9Y6X8 837 aa12.53□□□□□ -0.4
HPS1-208ENST00000467246 P4HBP07237 508 aaKnown RBP12.52□□□□□ -0.4
HPS1-208ENST00000467246 MYCLP12524 364 aaPredicted RBP12.52□□□□□ -0.4
HPS1-208ENST00000467246 GUCY2CP25092 1073 aa12.52□□□□□ -0.4
HPS1-208ENST00000467246 VSNL1P62760 191 aa12.52□□□□□ -0.4
HPS1-208ENST00000467246 BRD3Q15059 726 aa12.52□□□□□ -0.4
HPS1-208ENST00000467246 ASIC2Q16515 512 aa12.52□□□□□ -0.4
HPS1-208ENST00000467246 LONRF2Q1L5Z9 754 aa12.52□□□□□ -0.4
HPS1-208ENST00000467246 NSMFQ6X4W1 530 aa12.52□□□□□ -0.4
HPS1-208ENST00000467246 FUT8Q9BYC5 575 aa12.52□□□□□ -0.4
HPS1-208ENST00000467246 PLCB1Q9NQ66 1216 aa12.52□□□□□ -0.4
HPS1-208ENST00000467246 KCND2Q9NZV8 630 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms