RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 GIMAP6Q6P9H5 292 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.77□□□□□ -0.05
UBR4-210ENST00000466969 PDZD3Q86UT5 571 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 C12orf50Q8NA57 414 aaPredicted RBP14.77□□□□□ -0.05
UBR4-210ENST00000466969 SYTL5Q8TDW5 730 aaPredicted RBP14.77□□□□□ -0.05
UBR4-210ENST00000466969 SSH3Q8TE77 659 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 DNAJB3Q8WWF6 145 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 GATA6Q92908 595 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 MAF1Q9H063 256 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 RXFP3Q9NSD7 469 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 SPG21Q9NZD8 308 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 PADI3Q9ULW8 664 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 SQORQ9Y6N5 450 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 ITPR1Q14643 2758 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.76□□□□□ -0.05
UBR4-210ENST00000466969 BCAR3O75815 825 aa14.76□□□□□ -0.05
UBR4-210ENST00000466969 NR3C2P08235 984 aa14.76□□□□□ -0.05
UBR4-210ENST00000466969 MRPS6P82932 125 aaKnown RBP14.76□□□□□ -0.05
UBR4-210ENST00000466969 C15orf39Q6ZRI6 1047 aa14.76□□□□□ -0.05
UBR4-210ENST00000466969 FEZF2Q8TBJ5 459 aa14.76□□□□□ -0.05
UBR4-210ENST00000466969 ADAM32Q8TC27 787 aa14.76□□□□□ -0.05
UBR4-210ENST00000466969 EPS15L1Q9UBC2 864 aa14.76□□□□□ -0.05
UBR4-210ENST00000466969 NOP58Q9Y2X3 529 aaKnown RBP14.76□□□□□ -0.05
UBR4-210ENST00000466969 LAMA5O15230 3695 aa14.76□□□□□ -0.05
UBR4-210ENST00000466969 ADAMTS20P59510 1910 aa14.75□□□□□ -0.05
UBR4-210ENST00000466969 M0QZ92 97 aa14.75□□□□□ -0.05
UBR4-210ENST00000466969 N4BP1O75113 896 aaKnown RBP14.75□□□□□ -0.05
UBR4-210ENST00000466969 UBA1P22314 1058 aaKnown RBP14.75□□□□□ -0.05
UBR4-210ENST00000466969 TDO2P48775 406 aa14.75□□□□□ -0.05
UBR4-210ENST00000466969 SNW1Q13573 536 aaKnown RBP14.75□□□□□ -0.05
UBR4-210ENST00000466969 SIM2Q14190 667 aaPredicted RBP14.75□□□□□ -0.05
UBR4-210ENST00000466969 PPP2R5DQ14738 602 aa14.75□□□□□ -0.05
UBR4-210ENST00000466969 ZBTB41Q5SVQ8 909 aa14.75□□□□□ -0.05
UBR4-210ENST00000466969 IER5Q5VY09 327 aa14.75□□□□□ -0.05
UBR4-210ENST00000466969 LSM14BQ9BX40 385 aaKnown RBP14.75□□□□□ -0.05
UBR4-210ENST00000466969 PUS7LQ9H0K6 701 aaKnown RBP14.75□□□□□ -0.05
UBR4-210ENST00000466969 GPCPD1Q9NPB8 672 aa14.75□□□□□ -0.05
UBR4-210ENST00000466969 PRMT8Q9NR22 394 aaPredicted RBP14.75□□□□□ -0.05
UBR4-210ENST00000466969 PAG1Q9NWQ8 432 aa14.75□□□□□ -0.05
UBR4-210ENST00000466969 COL20A1Q9P218 1284 aa14.75□□□□□ -0.05
UBR4-210ENST00000466969 MTF2Q9Y483 593 aaPredicted RBP14.75□□□□□ -0.05
UBR4-210ENST00000466969 IGSF10Q6WRI0 2623 aa14.75□□□□□ -0.05
UBR4-210ENST00000466969 COL4A3Q01955 1670 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 GSG1L2A8MUP6 293 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 NCAM2O15394 837 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 RPLP2P05387 115 aaKnown RBP14.74□□□□□ -0.05
UBR4-210ENST00000466969 TGFB3P10600 412 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 MYCLP12524 364 aaPredicted RBP14.74□□□□□ -0.05
UBR4-210ENST00000466969 PBX3P40426 434 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 PRKCQQ04759 706 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 GIT2Q14161 759 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 PPFIBP1Q86W92 1011 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 MCF2L2Q86YR7 1114 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 SLC22A17Q8WUG5 538 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 TBC1D5Q92609 795 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 KLHL5Q96PQ7 755 aa14.74□□□□□ -0.05
UBR4-210ENST00000466969 LOXHD1Q8IVV2 1947 aa14.73□□□□□ -0.05
UBR4-210ENST00000466969 CHGBP05060 677 aa14.73□□□□□ -0.05
UBR4-210ENST00000466969 SLC3A2P08195 630 aaKnown RBP14.73□□□□□ -0.05
UBR4-210ENST00000466969 SP2Q02086 613 aa14.73□□□□□ -0.05
UBR4-210ENST00000466969 MLF2Q15773 248 aaPredicted RBP14.73□□□□□ -0.05
UBR4-210ENST00000466969 UTP14CQ5TAP6 766 aaKnown RBP14.73□□□□□ -0.05
UBR4-210ENST00000466969 STPG1Q5TH74 334 aa14.73□□□□□ -0.05
UBR4-210ENST00000466969 ZSCAN25Q6NSZ9 544 aa14.73□□□□□ -0.05
UBR4-210ENST00000466969 C19orf48Q6RUI8 117 aa14.73□□□□□ -0.05
UBR4-210ENST00000466969 BBXQ8WY36 941 aaPredicted RBP14.73□□□□□ -0.05
UBR4-210ENST00000466969 STRBPQ96SI9 672 aaKnown RBP14.73□□□□□ -0.05
UBR4-210ENST00000466969 DDX23Q9BUQ8 820 aaKnown RBP14.73□□□□□ -0.05
UBR4-210ENST00000466969 ATP6V0A4Q9HBG4 840 aa14.73□□□□□ -0.05
UBR4-210ENST00000466969 PXMP2Q9NR77 195 aa14.73□□□□□ -0.05
UBR4-210ENST00000466969 C1orf112Q9NSG2 853 aa14.73□□□□□ -0.05
UBR4-210ENST00000466969 TUBE1Q9UJT0 475 aa14.73□□□□□ -0.05
UBR4-210ENST00000466969 DENND3A2RUS2 1198 aa14.72□□□□□ -0.05
UBR4-210ENST00000466969 TSPY2A6NKD2 308 aa14.72□□□□□ -0.05
UBR4-210ENST00000466969 FGFR1P11362 822 aa14.72□□□□□ -0.05
UBR4-210ENST00000466969 NOVA1P51513 510 aaKnown RBP14.72□□□□□ -0.05
UBR4-210ENST00000466969 ZNF252P-AS1Q0IIN9 211 aa14.72□□□□□ -0.05
UBR4-210ENST00000466969 NFX1Q12986 1120 aaKnown RBP14.72□□□□□ -0.05
UBR4-210ENST00000466969 TRIM50Q86XT4 487 aa14.72□□□□□ -0.05
UBR4-210ENST00000466969 GLIS3Q8NEA6 775 aa14.72□□□□□ -0.05
UBR4-210ENST00000466969 SCNM1Q9BWG6 230 aa14.72□□□□□ -0.05
UBR4-210ENST00000466969 TMX1Q9H3N1 280 aa14.72□□□□□ -0.05
UBR4-210ENST00000466969 LTB4R2Q9NPC1 389 aa14.72□□□□□ -0.05
UBR4-210ENST00000466969 WASF3Q9UPY6 502 aa14.72□□□□□ -0.05
UBR4-210ENST00000466969 TRPV2Q9Y5S1 764 aa14.72□□□□□ -0.05
UBR4-210ENST00000466969 C2orf16Q68DN1 1984 aa14.71□□□□□ -0.05
UBR4-210ENST00000466969 HSPD1P10809 573 aaKnown RBP14.71□□□□□ -0.05
UBR4-210ENST00000466969 C19orf57Q0VDD7 668 aa14.71□□□□□ -0.05
UBR4-210ENST00000466969 PPFIA1Q13136 1202 aa14.71□□□□□ -0.05
UBR4-210ENST00000466969 RSPO2Q6UXX9 243 aaPredicted RBP14.71□□□□□ -0.05
UBR4-210ENST00000466969 FAM43BQ6ZT52 329 aaPredicted RBP14.71□□□□□ -0.05
UBR4-210ENST00000466969 SLC24A5Q71RS6 500 aa14.71□□□□□ -0.05
UBR4-210ENST00000466969 ERC1Q8IUD2 1116 aa14.71□□□□□ -0.05
UBR4-210ENST00000466969 LRRC43Q8N309 656 aa14.71□□□□□ -0.05
UBR4-210ENST00000466969 MYADMQ96S97 322 aa14.71□□□□□ -0.05
UBR4-210ENST00000466969 FAM49AQ9H0Q0 323 aaPredicted RBP14.71□□□□□ -0.05
UBR4-210ENST00000466969 WDR6Q9NNW5 1121 aaKnown RBP14.71□□□□□ -0.05
UBR4-210ENST00000466969 CLUHO75153 1309 aa14.7□□□□□ -0.06
UBR4-210ENST00000466969 IGSF9BQ9UPX0 1349 aa14.7□□□□□ -0.06
UBR4-210ENST00000466969 APPP05067 770 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms