RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
CMC1-205ENST00000466830 BANK1Q8NDB2 785 aa12.17□□□□□ -0.46
CMC1-205ENST00000466830 GJD4Q96KN9 370 aaPredicted RBP12.17□□□□□ -0.46
CMC1-205ENST00000466830 OSBPL9Q96SU4 736 aa12.17□□□□□ -0.46
CMC1-205ENST00000466830 POLD4Q9HCU8 107 aa12.17□□□□□ -0.46
CMC1-205ENST00000466830 TADA3O75528 432 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 LMNTD2Q8IXW0 634 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 CCDC197Q8NCU1 140 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 SMC1BQ8NDV3 1235 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 C7orf25Q9BPX7 421 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 CNOT10Q9H9A5 744 aaKnown RBP12.16□□□□□ -0.46
CMC1-205ENST00000466830 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
CMC1-205ENST00000466830 SLIT1O75093 1534 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 POC1B-GALNT4F8VUJ3 575 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 RASA1P20936 1047 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 IFT88Q13099 833 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 NSMCE1Q8WV22 266 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 RILPQ96NA2 401 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 HDAC6Q9UBN7 1215 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 GOLGA8SH3BPF8 625 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 CTNND1O60716 968 aaKnown RBP12.16□□□□□ -0.46
CMC1-205ENST00000466830 SUN1O94901 812 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 P4HBP07237 508 aaKnown RBP12.16□□□□□ -0.46
CMC1-205ENST00000466830 IL9RQ01113 521 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 KRT76Q01546 638 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 TSNAXIP1Q2TAA8 658 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 DALRD3Q5D0E6 543 aaKnown RBP12.16□□□□□ -0.46
CMC1-205ENST00000466830 ARMC9Q7Z3E5 817 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 AFAP1L2Q8N4X5 818 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 TC2NQ8N9U0 490 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 HERC5Q9UII4 1024 aaKnown RBP12.16□□□□□ -0.46
CMC1-205ENST00000466830 HMGB1P1B2RPK0 211 aaPredicted RBP12.16□□□□□ -0.46
CMC1-205ENST00000466830 GCLMP48507 274 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 C16orf86Q6ZW13 317 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 IRX2Q9BZI1 471 aaPredicted RBP12.16□□□□□ -0.46
CMC1-205ENST00000466830 SPC25Q9HBM1 224 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 ODF2LQ9ULJ1 636 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 TLR3O15455 904 aaKnown RBP12.16□□□□□ -0.46
CMC1-205ENST00000466830 KRT1P04264 644 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 RFX6Q8HWS3 928 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 CCHCR1Q8TD31 782 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 LRRC8CQ8TDW0 803 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 MED10Q9BTT4 135 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 EPC1Q9H2F5 836 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 NXF1Q9UBU9 619 aaKnown RBP12.16□□□□□ -0.46
CMC1-205ENST00000466830 STK38LQ9Y2H1 464 aa12.16□□□□□ -0.46
CMC1-205ENST00000466830 MEGF6O75095 1541 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 KIF20BQ96Q89 1820 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 CCDC160A6NGH7 325 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 IPO5O00410 1097 aaKnown RBP12.15□□□□□ -0.46
CMC1-205ENST00000466830 FXR1P51114 621 aaKnown RBP eCLIP12.15□□□□□ -0.46
CMC1-205ENST00000466830 YWHAGP61981 247 aaKnown RBP eCLIP12.15□□□□□ -0.46
CMC1-205ENST00000466830 PTPAQ15257 358 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 SURF1Q15526 300 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 CYP4F22Q6NT55 531 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 NFRKBQ6P4R8 1299 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 PDXDC1Q6P996 788 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 RBM43Q6ZSC3 357 aaKnown RBP12.15□□□□□ -0.46
CMC1-205ENST00000466830 RASGRP2Q7LDG7 609 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 MSTO1Q9BUK6 570 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 NOVA2Q9UNW9 492 aaKnown RBP12.15□□□□□ -0.46
CMC1-205ENST00000466830 AKT3Q9Y243 479 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 SRGNP10124 158 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 QARSP47897 775 aaKnown RBP12.15□□□□□ -0.46
CMC1-205ENST00000466830 VPS72Q15906 364 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 MROH1Q8NDA8 1641 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 A6NJR5 290 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 STXBP3O00186 592 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 LDHAP00338 332 aaKnown RBP12.15□□□□□ -0.46
CMC1-205ENST00000466830 STK4Q13043 487 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 EIF2AK1Q9BQI3 630 aaKnown RBP12.15□□□□□ -0.46
CMC1-205ENST00000466830 ZMYND12Q9H0C1 365 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 PODXLO00592 558 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 RASGRF2O14827 1237 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 MED7O43513 233 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 XPOTO43592 962 aaKnown RBP12.15□□□□□ -0.46
CMC1-205ENST00000466830 SLC12A2P55011 1212 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 PRPF38AQ8NAV1 312 aaKnown RBP12.15□□□□□ -0.46
CMC1-205ENST00000466830 CHP1Q99653 195 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 IFT122Q9HBG6 1241 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 SYNGAP1Q96PV0 1343 aa12.15□□□□□ -0.46
CMC1-205ENST00000466830 GRIN1Q05586 938 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 EEPD1Q7L9B9 569 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 GIMAP8Q8ND71 665 aaPredicted RBP12.14□□□□□ -0.47
CMC1-205ENST00000466830 AGXT2Q9BYV1 514 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 KIAA1586Q9HCI6 787 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 RAVER2Q9HCJ3 691 aaKnown RBP12.14□□□□□ -0.47
CMC1-205ENST00000466830 MORC2Q9Y6X9 1032 aaPredicted RBP12.14□□□□□ -0.47
CMC1-205ENST00000466830 PDXKO00764 312 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 ATP1A1P05023 1023 aaKnown RBP12.14□□□□□ -0.47
CMC1-205ENST00000466830 CD58P19256 250 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 GPC5P78333 572 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 FRMD5Q7Z6J6 570 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 ZBTB33Q86T24 672 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 CCT6BQ92526 530 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 HPS3Q969F9 1004 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 RAB3IPQ96QF0 476 aaPredicted RBP12.14□□□□□ -0.47
CMC1-205ENST00000466830 LRRD1A4D1F6 860 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 CRCPO75575 148 aa12.14□□□□□ -0.47
CMC1-205ENST00000466830 LXNQ9BS40 222 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms