RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 WNT8BQ93098 351 aa16.17■□□□□ 0.18
DNMT3A-208ENST00000466601 SH2D3AQ9BRG2 576 aa16.17■□□□□ 0.18
DNMT3A-208ENST00000466601 MMTAG2Q9BU76 263 aaKnown RBP16.17■□□□□ 0.18
DNMT3A-208ENST00000466601 PPP1R12CQ9BZL4 782 aa16.17■□□□□ 0.18
DNMT3A-208ENST00000466601 PCDHA2Q9Y5H9 948 aa16.17■□□□□ 0.18
DNMT3A-208ENST00000466601 TRIP12Q14669 1992 aaPredicted RBP16.17■□□□□ 0.18
DNMT3A-208ENST00000466601 H0YGN5 161 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 ZBTB39O15060 712 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 MAGEB2O15479 319 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 PPP6R2O75170 966 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 C22orf31O95567 290 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 XRCC6P12956 609 aaKnown RBP eCLIP16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 NCLP19338 710 aaKnown RBP16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 ITGB8P26012 769 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 CYP2C18P33260 490 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 NPEPPSP55786 919 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 ECM1Q16610 540 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 TRIM71Q2Q1W2 868 aaKnown RBP16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 XKR9Q5GH70 373 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 POTEGQ6S5H5 508 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 KRI1Q8N9T8 703 aaKnown RBP16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 RETREG2Q8NC44 543 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 CEP170P1Q96L14 293 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 CLIC6Q96NY7 704 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 NACC1Q96RE7 527 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 CEP89Q96ST8 783 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 CYP26B1Q9NR63 512 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 ANKEF1Q9NU02 776 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 PCDH10Q9P2E7 1040 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 UMODL1Q5DID0 1318 aa16.16■□□□□ 0.18
DNMT3A-208ENST00000466601 A0A087WWV3 80 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 SMIM35A0A1B0GVV1 85 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 CKBP12277 381 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 UBA7P41226 1012 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 KRT85P78386 507 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 RBL2Q08999 1139 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 TBC1D8BQ0IIM8 1120 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 CABP7Q86V35 215 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 KCNG4Q8TDN1 519 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 PIGOQ8TEQ8 1089 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 DNAJB3Q8WWF6 145 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 CHAMP1Q96JM3 812 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 IPO9Q96P70 1041 aaKnown RBP16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 RCOR1Q9UKL0 485 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 KIAA1024Q9UPX6 916 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 PPME1Q9Y570 386 aa16.15■□□□□ 0.18
DNMT3A-208ENST00000466601 CAND2O75155 1236 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 THPOP40225 353 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 RARRES1P49788 294 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 CCL23P55773 120 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 ZRSR1Q15695 479 aaKnown RBP16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 SPECC1Q5M775 1068 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 HYIQ5T013 277 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 MFSD5Q6N075 450 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 EFCAB12Q6NXP0 572 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 RPAINQ86UA6 219 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 RSPH3Q86UC2 560 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 METTL13Q8N6R0 699 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 BADQ92934 168 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 LBHD1Q9BQE6 289 aaPredicted RBP16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 FAM49AQ9H0Q0 323 aaPredicted RBP16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 DDX19AQ9NUU7 478 aaKnown RBP16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 CHMP5Q9NZZ3 219 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 KDM3AQ9Y4C1 1321 aa16.14■□□□□ 0.17
DNMT3A-208ENST00000466601 SLC26A4O43511 780 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 MAFO75444 373 aaPredicted RBP16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 RPLP2P05387 115 aaKnown RBP16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 IQCF3P0C7M6 154 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 SELPP16109 830 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 TMOD1P28289 359 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 RFC5P40937 340 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 MDM2Q00987 491 aaPredicted RBP16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 GRB10Q13322 594 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 ZNF618Q5T7W0 954 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 LRRC8DQ7L1W4 858 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 KIAA0319LQ8IZA0 1049 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 TMEM199Q8N511 208 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 CALML4Q96GE6 196 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 EPSTI1Q96J88 318 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 CDK5RAP3Q96JB5 506 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 CCDC43Q96MW1 224 aaKnown RBP16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 PNMA5Q96PV4 448 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 JPH2Q9BR39 696 aaPredicted RBP16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 CCSER1Q9C0I3 900 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 NT5C3AQ9H0P0 336 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 WNT8AQ9H1J5 351 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 SUGCTQ9HAC7 445 aa16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 DBR1Q9UK59 544 aaKnown RBP16.13■□□□□ 0.17
DNMT3A-208ENST00000466601 IGKV6-21A0A0C4DH24 114 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 CUTAO60888 179 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 CLCN3P51790 818 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 POLGP54098 1239 aaPredicted RBP16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 TRAF7Q6Q0C0 670 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 USP49Q70CQ1 688 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 EXOC8Q8IYI6 725 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 NME8Q8N427 588 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 LRRC71Q8N4P6 559 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms