RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PCDHGC5Q9Y5F6 944 aa7.22□□□□□ -1.25
NCL-208ENST00000466274 U3KQE9 123 aa7.22□□□□□ -1.25
NCL-208ENST00000466274 SALL1Q9NSC2 1324 aa7.22□□□□□ -1.25
NCL-208ENST00000466274 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.21□□□□□ -1.26
NCL-208ENST00000466274 A0A0U1RQG5 324 aaPredicted RBP7.21□□□□□ -1.26
NCL-208ENST00000466274 ARVCFO00192 962 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 LEFTY1O75610 366 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 CNMDO75829 334 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 CA3P07451 260 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 PFKMP08237 780 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 MYOGP15173 224 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 KCNA5P22460 613 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 BTDP43251 543 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 USP14P54578 494 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 TRIM26Q12899 539 aaPredicted RBP7.21□□□□□ -1.26
NCL-208ENST00000466274 PRAMEF19Q5SWL8 479 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 SPTY2D1Q68D10 685 aaPredicted RBP7.21□□□□□ -1.26
NCL-208ENST00000466274 LBX2Q6XYB7 198 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 BMP8AQ7Z5Y6 402 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 ABRAQ8N0Z2 381 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 PHOSPHO2Q8TCD6 241 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 STK35Q8TDR2 534 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 LPIN2Q92539 896 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 ATOH1Q92858 354 aaPredicted RBP7.21□□□□□ -1.26
NCL-208ENST00000466274 KCNB2Q92953 911 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 DHX36Q9H2U1 1008 aaKnown RBP7.21□□□□□ -1.26
NCL-208ENST00000466274 HIPK3Q9H422 1215 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 CERS4Q9HA82 394 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 DDX4Q9NQI0 724 aaKnown RBP7.21□□□□□ -1.26
NCL-208ENST00000466274 GPN3Q9UHW5 284 aaPredicted RBP7.21□□□□□ -1.26
NCL-208ENST00000466274 DENND2AQ9ULE3 1009 aa7.21□□□□□ -1.26
NCL-208ENST00000466274 GRM8O00222 908 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 PAPLNO95428 1278 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 ACTN1P12814 892 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 CYP2C18P33260 490 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 CD96P40200 585 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 CDK7P50613 346 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 GRB10Q13322 594 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 KCNA10Q16322 511 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 KRT40Q6A162 431 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 CATSPERGQ6ZRH7 1159 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 PDZD3Q86UT5 571 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 CCDC146Q8IYE0 955 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 STK11IPQ8N1F8 1099 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 POU5F2Q8N7G0 328 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 SHCBP1Q8NEM2 672 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.2□□□□□ -1.26
NCL-208ENST00000466274 NETO1Q8TDF5 533 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 DMRTB1Q96MA1 342 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 SLC9A7Q96T83 725 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 FEZ1Q99689 392 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 SEZ6LQ9BYH1 1024 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 MROH8Q9H579 483 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 KRT82Q9NSB4 513 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 HOXC10Q9NYD6 342 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 CNPY2Q9Y2B0 182 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 RFX7Q2KHR2 1363 aa7.2□□□□□ -1.26
NCL-208ENST00000466274 CHD9Q3L8U1 2897 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 DLG5Q8TDM6 1919 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 KRT37O76014 449 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 C8AP07357 584 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 LDHCP07864 332 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 CD8BP10966 210 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 FCER1AP12319 257 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 IL9P15248 144 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 GSTO1P78417 241 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 PPP2R3AQ06190 1150 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 TCF15Q12870 199 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 ATF7IPQ6VMQ6 1270 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 FAM126BQ8IXS8 530 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 CRACR2BQ8N4Y2 399 aaPredicted RBP7.19□□□□□ -1.26
NCL-208ENST00000466274 VGLL2Q8N8G2 317 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 MAML3Q96JK9 1138 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 C12orf42Q96LP6 360 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 ARID3AQ99856 593 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 RBCK1Q9BYM8 510 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 BCO2Q9BYV7 579 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 PPP4R2Q9NY27 417 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 BTBD7Q9P203 1132 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 FAM184BQ9ULE4 1060 aa7.19□□□□□ -1.26
NCL-208ENST00000466274 TCF20Q9UGU0 1960 aaKnown RBP7.19□□□□□ -1.26
NCL-208ENST00000466274 GPR75-ASB3A0A0A6YYF3 556 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 EPOPA6NHQ4 379 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 PROB1E7EW31 1015 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 ERCC3P19447 782 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 FGFR2P21802 821 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 TAP1Q03518 808 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 WDR43Q15061 677 aaKnown RBP eCLIP7.18□□□□□ -1.269e-49■□□□□ 8.6
NCL-208ENST00000466274 LRRC24Q50LG9 513 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 HERC4Q5GLZ8 1057 aaPredicted RBP7.18□□□□□ -1.26
NCL-208ENST00000466274 BEND3Q5T5X7 828 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 G2E3Q7L622 706 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 FOXP4Q8IVH2 680 aaPredicted RBP7.18□□□□□ -1.26
NCL-208ENST00000466274 ADHFE1Q8IWW8 467 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 MB21D1Q8N884 522 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 KLHDC9Q8NEP7 349 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 EDAQ92838 391 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 ALKBH8Q96BT7 664 aaKnown RBP7.18□□□□□ -1.26
NCL-208ENST00000466274 MOV10L1Q9BXT6 1211 aaKnown RBP7.18□□□□□ -1.26
NCL-208ENST00000466274 SPATC1LQ9H0A9 340 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms