RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 FAM207AQ9NSI2 230 aaPredicted RBP20.12■□□□□ 0.81
COL9A3-205ENST00000466192 TYW1Q9NV66 732 aaKnown RBP20.12■□□□□ 0.81
COL9A3-205ENST00000466192 SEL1LQ9UBV2 794 aa20.12■□□□□ 0.81
COL9A3-205ENST00000466192 DBR1Q9UK59 544 aaKnown RBP20.12■□□□□ 0.81
COL9A3-205ENST00000466192 EPN1Q9Y6I3 576 aaPredicted RBP20.12■□□□□ 0.81
COL9A3-205ENST00000466192 GLTPD2A6NH11 291 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 WDR64B1ANS9 1081 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 EIF3DO15371 548 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL9A3-205ENST00000466192 MAFGO15525 162 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 NDUFA10O95299 355 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 ABL1P00519 1130 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 RARRES1P49788 294 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 JAK3P52333 1124 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 ARHGAP29Q52LW3 1261 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 LRRN4CLQ8ND94 238 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 ZMYM2Q9UBW7 1377 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 EPHB6O15197 1021 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 CALUO43852 315 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-205ENST00000466192 HIP1RO75146 1068 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 KCNA2P16389 499 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 SFNP31947 248 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 ZNF720Q7Z2F6 126 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 IKZF4Q9H2S9 585 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 MMRN2Q9H8L6 949 aa20.11■□□□□ 0.81
COL9A3-205ENST00000466192 MYH9P35579 1960 aaKnown RBP20.1■□□□□ 0.81
COL9A3-205ENST00000466192 A0A1W2PQJ5 194 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 TMEM150BA6NC51 233 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 CXCL11O14625 94 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 TGFB1I1O43294 461 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 KIF5CO60282 957 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 YWHABP31946 246 aaKnown RBP20.1■□□□□ 0.81
COL9A3-205ENST00000466192 EAPPQ56P03 285 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-205ENST00000466192 ODR4Q5SWX8 454 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 RIOX2Q8IUF8 465 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 FAM178BQ8IXR5 827 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 C4orf19Q8IY42 314 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 SMAP1Q8IYB5 467 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-205ENST00000466192 ZNF397Q8NF99 534 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-205ENST00000466192 SMCR8Q8TEV9 937 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-205ENST00000466192 SH2D3AQ9BRG2 576 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 TAF1DQ9H5J8 278 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-205ENST00000466192 ZNHIT6Q9NWK9 470 aaKnown RBP20.1■□□□□ 0.81
COL9A3-205ENST00000466192 ARID2Q68CP9 1835 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 PSMC5P62195 406 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 CNTN2Q02246 1040 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 KCNMA1Q12791 1236 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 MEA1Q16626 185 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 ZNF746Q6NUN9 644 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-205ENST00000466192 KSR1Q8IVT5 923 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 ANKRD35Q8N283 1001 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 MOV10L1Q9BXT6 1211 aaKnown RBP20.1■□□□□ 0.81
COL9A3-205ENST00000466192 TCEAL9Q9UHQ7 104 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 KCNH4Q9UQ05 1017 aa20.1■□□□□ 0.81
COL9A3-205ENST00000466192 NR3C1P04150 777 aa20.09■□□□□ 0.81
COL9A3-205ENST00000466192 IRX3P78415 501 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-205ENST00000466192 GPR162Q16538 588 aa20.09■□□□□ 0.81
COL9A3-205ENST00000466192 MAEAQ7L5Y9 396 aa20.09■□□□□ 0.81
COL9A3-205ENST00000466192 SENP7Q9BQF6 1050 aa20.09■□□□□ 0.81
COL9A3-205ENST00000466192 ASCC2Q9H1I8 757 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-205ENST00000466192 REXO2Q9Y3B8 237 aaKnown RBP20.09■□□□□ 0.81
COL9A3-205ENST00000466192 TELO2Q9Y4R8 837 aa20.09■□□□□ 0.81
COL9A3-205ENST00000466192 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.09■□□□□ 0.81
COL9A3-205ENST00000466192 CLIC2O15247 247 aa20.08■□□□□ 0.81
COL9A3-205ENST00000466192 STAM2O75886 525 aa20.08■□□□□ 0.81
COL9A3-205ENST00000466192 FSTL1Q12841 308 aa20.08■□□□□ 0.81
COL9A3-205ENST00000466192 PPIL2Q13356 520 aa20.08■□□□□ 0.81
COL9A3-205ENST00000466192 UTP14CQ5TAP6 766 aaKnown RBP20.08■□□□□ 0.81
COL9A3-205ENST00000466192 TRMT1LQ7Z2T5 733 aaKnown RBP20.08■□□□□ 0.81
COL9A3-205ENST00000466192 SPATC1LQ9H0A9 340 aa20.08■□□□□ 0.81
COL9A3-205ENST00000466192 MOGSQ13724 837 aa20.08■□□□□ 0.8
COL9A3-205ENST00000466192 ELF2Q15723 593 aa20.08■□□□□ 0.8
COL9A3-205ENST00000466192 ZNF569Q5MCW4 686 aa20.08■□□□□ 0.8
COL9A3-205ENST00000466192 DNERQ8NFT8 737 aa20.08■□□□□ 0.8
COL9A3-205ENST00000466192 RDM1Q8NG50 284 aa20.08■□□□□ 0.8
COL9A3-205ENST00000466192 OPTNQ96CV9 577 aa20.08■□□□□ 0.8
COL9A3-205ENST00000466192 IQCDQ96DY2 449 aa20.08■□□□□ 0.8
COL9A3-205ENST00000466192 IWS1Q96ST2 819 aa20.08■□□□□ 0.8
COL9A3-205ENST00000466192 PCDHA10Q9Y5I2 948 aa20.08■□□□□ 0.8
COL9A3-205ENST00000466192 SPATA31C2B4DYI2 1134 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 BACH1O14867 736 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 USO1O60763 962 aaKnown RBP20.07■□□□□ 0.8
COL9A3-205ENST00000466192 AKAP3O75969 853 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 ARHGAP25P42331 645 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 HERVK_113P62684 666 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 FRMD5Q7Z6J6 570 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 PDCL2Q8N4E4 241 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 PAGR1Q9BTK6 254 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 STRA6Q9BX79 667 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 NHEJ1Q9H9Q4 299 aaPredicted RBP20.07■□□□□ 0.8
COL9A3-205ENST00000466192 FBXO40Q9UH90 709 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 FAM184BQ9ULE4 1060 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 AGTPBP1Q9UPW5 1226 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 PFASO15067 1338 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 UBE4BO95155 1302 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 CNMDO75829 334 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 PPP1R37O75864 691 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 CASP4P49662 377 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 GNPTABQ3T906 1256 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 PLA2G4FQ68DD2 849 aa20.07■□□□□ 0.8
COL9A3-205ENST00000466192 NCAPG2Q86XI2 1143 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms