RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 PCDHGA3Q9Y5H0 932 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 PCDHGA2Q9Y5H1 932 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 TIMM13Q9Y5L4 95 aaPredicted RBP5.79□□□□□ -1.48
CDK13-203ENST00000465643 KIF20BQ96Q89 1820 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 PIK3C2AO00443 1686 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 ALS2Q96Q42 1657 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 NSD2O96028 1365 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 NKRFO15226 690 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDK13-203ENST00000465643 KRT18P05783 430 aaKnown RBP5.79□□□□□ -1.48
CDK13-203ENST00000465643 ZBTB48P10074 688 aaPredicted RBP5.79□□□□□ -1.48
CDK13-203ENST00000465643 CCND1P24385 295 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 CPZQ66K79 652 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 CCSAPQ6IQ19 270 aaPredicted RBP5.79□□□□□ -1.48
CDK13-203ENST00000465643 PTRH1Q86Y79 214 aaKnown RBP5.79□□□□□ -1.48
CDK13-203ENST00000465643 KCNH5Q8NCM2 988 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 SLC39A13Q96H72 371 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 FAXDC2Q96IV6 333 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 ATP13A1Q9HD20 1204 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 SEMA3GQ9NS98 782 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 RAXQ9Y2V3 346 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 SPEF1Q9Y4P9 236 aa5.79□□□□□ -1.48
CDK13-203ENST00000465643 WTIPA6NIX2 430 aaPredicted RBP5.78□□□□□ -1.48
CDK13-203ENST00000465643 ULK1O75385 1050 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 RFPL1O75677 317 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 GCP02774 474 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 CT47B1P0C2W7 299 aaPredicted RBP5.78□□□□□ -1.48
CDK13-203ENST00000465643 TEKQ02763 1124 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 CRY1Q16526 586 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 GORABQ5T7V8 394 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 ARHGAP27Q6ZUM4 889 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 CEP68Q76N32 757 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 OTOP1Q7RTM1 612 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 CREG2Q8IUH2 290 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 PLD6Q8N2A8 252 aaKnown RBP5.78□□□□□ -1.48
CDK13-203ENST00000465643 ELF4Q99607 663 aaPredicted RBP5.78□□□□□ -1.48
CDK13-203ENST00000465643 SPATA31A6Q5VVP1 1343 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 OVOS2A0A0J9YW53 1432 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 OVOS2Q6IE36 1432 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 SHPRHQ149N8 1683 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 ANP32CO43423 234 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 MYO1BO43795 1136 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 SNUPNO95149 360 aaKnown RBP5.78□□□□□ -1.48
CDK13-203ENST00000465643 FBLN1P23142 703 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 PTX3P26022 381 aaPredicted RBP5.78□□□□□ -1.48
CDK13-203ENST00000465643 RPL11P62913 178 aaKnown RBP5.78□□□□□ -1.48
CDK13-203ENST00000465643 PPP4R4Q6NUP7 873 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 CD163Q86VB7 1156 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 CPA6Q8N4T0 437 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 EFHBQ8N7U6 833 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 MORC4Q8TE76 937 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 TP53INP1Q96A56 240 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 LRGUKQ96M69 825 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 MPHOSPH6Q99547 160 aaKnown RBP5.78□□□□□ -1.48
CDK13-203ENST00000465643 SPOCK3Q9BQ16 436 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 PRDM11Q9NQV5 511 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 ANLNQ9NQW6 1124 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 MARCH2Q9P0N8 246 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 FBLN5Q9UBX5 448 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 MED1Q15648 1581 aaPredicted RBP5.78□□□□□ -1.48
CDK13-203ENST00000465643 USP19O94966 1318 aa5.78□□□□□ -1.48
CDK13-203ENST00000465643 ESR1P03372 595 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 AMPHP49418 695 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 HTRA3P83110 453 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 LACTBP83111 547 aaPredicted RBP5.77□□□□□ -1.49
CDK13-203ENST00000465643 IRF9Q00978 393 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 OCRLQ01968 901 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 EGR3Q06889 387 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 PDCD1Q15116 288 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 TERF2Q15554 542 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 CHRNA2Q15822 529 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 ARHGAP36Q6ZRI8 547 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 PNMA8AQ86V59 439 aaPredicted RBP5.77□□□□□ -1.49
CDK13-203ENST00000465643 SH3RF2Q8TEC5 729 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 TGFBRAP1Q8WUH2 860 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 ZNF281Q9Y2X9 895 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 COL22A1Q8NFW1 1626 aaPredicted RBP5.77□□□□□ -1.49
CDK13-203ENST00000465643 PHRF1Q9P1Y6 1649 aaKnown RBP5.77□□□□□ -1.49
CDK13-203ENST00000465643 GSTA4O15217 222 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 TBC1D8O95759 1140 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 CEACAM5P06731 702 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 SESN3P58005 492 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 LRRC32Q14392 662 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 RRS1Q15050 365 aaKnown RBP5.77□□□□□ -1.49
CDK13-203ENST00000465643 SEC23AQ15436 765 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 ANGEL2Q5VTE6 544 aaKnown RBP5.77□□□□□ -1.49
CDK13-203ENST00000465643 DUSP27Q5VZP5 1158 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 RNF111Q6ZNA4 994 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 RBM12BQ8IXT5 1001 aaKnown RBP5.77□□□□□ -1.49
CDK13-203ENST00000465643 TMEM169Q96HH4 297 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 CAMKK2Q96RR4 588 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 TOMM22Q9NS69 142 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 OBP2AQ9NY56 170 aa5.77□□□□□ -1.49
CDK13-203ENST00000465643 KIAA0232Q92628 1395 aa5.76□□□□□ -1.49
CDK13-203ENST00000465643 NPC1L1Q9UHC9 1359 aa5.76□□□□□ -1.49
CDK13-203ENST00000465643 SLIT3O75094 1523 aa5.76□□□□□ -1.49
CDK13-203ENST00000465643 TRBV23OR9-2A0A075B6M9 112 aa5.76□□□□□ -1.49
CDK13-203ENST00000465643 MYL1P05976 194 aa5.76□□□□□ -1.49
CDK13-203ENST00000465643 GNAT1P11488 350 aa5.76□□□□□ -1.49
CDK13-203ENST00000465643 SMAD3P84022 425 aaKnown RBP5.76□□□□□ -1.49
CDK13-203ENST00000465643 SMAD2Q15796 467 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms