RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 LINC01565O15544 149 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 MBTPS2O43462 519 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 TOB1P50616 345 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-215ENST00000465457 ORC2Q13416 577 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-215ENST00000465457 SNW1Q13573 536 aaKnown RBP15.58■□□□□ 0.08
HDAC6-215ENST00000465457 PWP2Q15269 919 aaKnown RBP15.58■□□□□ 0.08
HDAC6-215ENST00000465457 NPY5RQ15761 445 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 HEATR3Q7Z4Q2 680 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 FBXO11Q86XK2 927 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 ELOA2Q8IYF1 753 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-215ENST00000465457 OXER1Q8TDS5 423 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 CCDC34Q96HJ3 373 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 GOLPH3LQ9H4A5 285 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 C6orf50Q9HD87 102 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 GPCPD1Q9NPB8 672 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 FAM13BQ9NYF5 915 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 RIF1Q5UIP0 2472 aaKnown RBP15.58■□□□□ 0.08
HDAC6-215ENST00000465457 hCG_1642624A0A1W2PR95 340 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 CYTH3O43739 400 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 GFRA3O60609 400 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 EFCAB14O75071 495 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 UPP2O95045 317 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 PSEN2P49810 448 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 PTPN5P54829 565 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 TYRO3Q06418 890 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 HYAL1Q12794 435 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 CTC1Q2NKJ3 1217 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 TTC38Q5R3I4 469 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 RESP18Q5W5W9 173 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 WWC2Q6AWC2 1192 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 BTNL9Q6UXG8 535 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 SEPT14Q6ZU15 432 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 TEX2Q8IWB9 1127 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 TMEM192Q8IY95 271 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 ZMYND12Q9H0C1 365 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 GLT8D2Q9H1C3 349 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 COL20A1Q9P218 1284 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 HOOK1Q9UJC3 728 aaKnown RBP15.57■□□□□ 0.08
HDAC6-215ENST00000465457 HPSEQ9Y251 543 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 SRPRBQ9Y5M8 271 aaKnown RBP15.57■□□□□ 0.08
HDAC6-215ENST00000465457 FAM186AA6NE01 2351 aa15.57■□□□□ 0.08
HDAC6-215ENST00000465457 CCDC194A0A1B0GVG4 234 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-215ENST00000465457 TMEM221A6NGB7 291 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 M0R296 226 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 SORBS3O60504 671 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 PARNO95453 639 aaKnown RBP15.56■□□□□ 0.08
HDAC6-215ENST00000465457 GH1P01241 217 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 AMHP03971 560 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 LINC00271P0C7V0 271 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 GOLGA8HP0CJ92 632 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 PFKFB1P16118 471 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 NAPAP54920 295 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 VCPP55072 806 aaKnown RBP15.56■□□□□ 0.08
HDAC6-215ENST00000465457 PTK7Q13308 1070 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 MFSD10Q14728 455 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 KIAA0753Q2KHM9 967 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 KRT25Q7Z3Z0 450 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 C7orf31Q8N865 590 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 TBC1D5Q92609 795 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 EDAQ92838 391 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 YME1L1Q96TA2 773 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 PYM1Q9BRP8 204 aaKnown RBP15.56■□□□□ 0.08
HDAC6-215ENST00000465457 CPVLQ9H3G5 476 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 FAM50BQ9Y247 325 aa15.56■□□□□ 0.08
HDAC6-215ENST00000465457 PNMA6FA0A0J9YX94 578 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 HAS3O00219 553 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 LAD1O00515 517 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 GRM6O15303 877 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 F2P00734 622 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 MARCKSP29966 332 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-215ENST00000465457 SYKP43405 635 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 NDUFA8P51970 172 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 TRAF1Q13077 416 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 ZRSR1Q15695 479 aaKnown RBP15.55■□□□□ 0.08
HDAC6-215ENST00000465457 CAMK4Q16566 473 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 STX1AQ16623 288 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 USH1GQ495M9 461 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 ARL6IP4Q66PJ3 421 aaKnown RBP15.55■□□□□ 0.08
HDAC6-215ENST00000465457 DNERQ8NFT8 737 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 FAM200AQ8TCP9 573 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 GPKOWQ92917 476 aaPredicted RBP eCLIP15.55■□□□□ 0.08
HDAC6-215ENST00000465457 PBXIP1Q96AQ6 731 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 SDF4Q9BRK5 362 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 FBXO2Q9UK22 296 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-215ENST00000465457 PCDHB6Q9Y5E3 794 aa15.55■□□□□ 0.08
HDAC6-215ENST00000465457 A0A1B0GVL5 298 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 M0R2N6 131 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 ZNF202O95125 648 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 THPOP40225 353 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 ATP2C1P98194 919 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-215ENST00000465457 SLC35G1Q2M3R5 365 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 PLEKHG4Q58EX7 1191 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 MCTP2Q6DN12 878 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 KANK3Q6NY19 840 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 SHC4Q6S5L8 630 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 TRIM67Q6ZTA4 783 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 PPP1R9BQ96SB3 815 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 PANK2Q9BZ23 570 aa15.54■□□□□ 0.08
HDAC6-215ENST00000465457 PLXNA4Q9HCM2 1894 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms