RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 KANK2Q63ZY3 851 aa6.75□□□□□ -1.33
UBR4-209ENST00000465036 TMEM200BQ69YZ2 307 aa6.75□□□□□ -1.33
UBR4-209ENST00000465036 EP400NLQ6ZTU2 488 aa6.75□□□□□ -1.33
UBR4-209ENST00000465036 ADGRE4PQ86SQ3 457 aa6.75□□□□□ -1.33
UBR4-209ENST00000465036 PTRH1Q86Y79 214 aaKnown RBP6.75□□□□□ -1.33
UBR4-209ENST00000465036 CHFRQ96EP1 664 aa6.75□□□□□ -1.33
UBR4-209ENST00000465036 OR10A2Q9H208 303 aa6.75□□□□□ -1.33
UBR4-209ENST00000465036 CBLCQ9ULV8 474 aa6.75□□□□□ -1.33
UBR4-209ENST00000465036 PCDHA8Q9Y5H6 950 aa6.75□□□□□ -1.33
UBR4-209ENST00000465036 TRBV23-1A0A0A0MS06 115 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 MPIG6BO95866 241 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 PYGMP11217 842 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 ECE1P42892 770 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 KCNQ1P51787 676 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 GABREP78334 506 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 GUCY1A3Q02108 690 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 FOXL1Q12952 345 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 RASGRF1Q13972 1273 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 NOLC1Q14978 699 aaKnown RBP eCLIP6.74□□□□□ -1.33
UBR4-209ENST00000465036 SMN1Q16637 294 aaKnown RBP6.74□□□□□ -1.33
UBR4-209ENST00000465036 LONRF2Q1L5Z9 754 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 FAM47CQ5HY64 1035 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 ZBTB38Q8NAP3 1195 aaPredicted RBP6.74□□□□□ -1.33
UBR4-209ENST00000465036 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 TRIM55Q9BYV6 548 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 TRIM8Q9BZR9 551 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 C12orf65Q9H3J6 166 aaKnown RBP6.74□□□□□ -1.33
UBR4-209ENST00000465036 PLA2G3Q9NZ20 509 aa6.74□□□□□ -1.33
UBR4-209ENST00000465036 FANCD2Q9BXW9 1451 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 A0A0G2JNJ9 132 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 U2SURPO15042 1029 aaKnown RBP6.73□□□□□ -1.33
UBR4-209ENST00000465036 PDPK1O15530 556 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 JAM2P57087 298 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 INHBEP58166 350 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 ST5P78524 1137 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 HGFACQ04756 655 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 SPATC1Q76KD6 591 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 ZNF808Q8N4W9 903 aaPredicted RBP6.73□□□□□ -1.33
UBR4-209ENST00000465036 IPO9Q96P70 1041 aaKnown RBP6.73□□□□□ -1.33
UBR4-209ENST00000465036 CEP89Q96ST8 783 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 CDC6Q99741 560 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 AMNQ9BXJ7 453 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 CCDC113Q9H0I3 377 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 OR10A5Q9H207 317 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 SMURF1Q9HCE7 757 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 C11orf21Q9P2W6 132 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 Q9UFV3 132 aa6.73□□□□□ -1.33
UBR4-209ENST00000465036 C1SP09871 688 aa6.72□□□□□ -1.33
UBR4-209ENST00000465036 DGCR2P98153 550 aa6.72□□□□□ -1.33
UBR4-209ENST00000465036 PCOLCEQ15113 449 aa6.72□□□□□ -1.33
UBR4-209ENST00000465036 PLEKHG4BQ96PX9 1271 aa6.72□□□□□ -1.33
UBR4-209ENST00000465036 KIAA1683Q9H0B3 1180 aa6.72□□□□□ -1.33
UBR4-209ENST00000465036 MRC2Q9UBG0 1479 aa6.72□□□□□ -1.33
UBR4-209ENST00000465036 PRAMEF25A6NGN4 478 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 HIBADHP31937 336 aaKnown RBP6.71□□□□□ -1.34
UBR4-209ENST00000465036 MC4RP32245 332 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 MSX2P35548 267 aaPredicted RBP6.71□□□□□ -1.34
UBR4-209ENST00000465036 ADCY8P40145 1251 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 MRE11P49959 708 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 MEOX1P50221 254 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 INHBCP55103 352 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 NBPF6Q5VWK0 638 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 OTOP2Q7RTS6 562 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 GPR135Q8IZ08 494 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 WDR48Q8TAF3 677 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 NBPF4Q96M43 638 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 CEP164Q9UPV0 1460 aa6.71□□□□□ -1.34
UBR4-209ENST00000465036 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 CCDC66A2RUB6 948 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 PEX11BO96011 259 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 KRT15P19012 456 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 CD83Q01151 205 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 HHEXQ03014 270 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 MOGSQ13724 837 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 TUBA3CQ13748 450 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 GRM7Q14831 915 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 ZC3H12BQ5HYM0 836 aaKnown RBP6.7□□□□□ -1.34
UBR4-209ENST00000465036 FAM209AQ5JX71 171 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 FOXB2Q5VYV0 432 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 TUBA3EQ6PEY2 450 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 FILIP1Q7Z7B0 1213 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 CKAP2LQ8IYA6 745 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 IKZF4Q9H2S9 585 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 TLR9Q9NR96 1032 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 VWA7Q9Y334 891 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 ASB1Q9Y576 335 aa6.7□□□□□ -1.34
UBR4-209ENST00000465036 CYP27B1O15528 508 aa6.69□□□□□ -1.34
UBR4-209ENST00000465036 SLC26A4O43511 780 aa6.69□□□□□ -1.34
UBR4-209ENST00000465036 SSRP1Q08945 709 aaKnown RBP6.69□□□□□ -1.34
UBR4-209ENST00000465036 SEC23AQ15436 765 aa6.69□□□□□ -1.34
UBR4-209ENST00000465036 MTERF2Q49AM1 385 aa6.69□□□□□ -1.34
UBR4-209ENST00000465036 FNDC7Q5VTL7 733 aa6.69□□□□□ -1.34
UBR4-209ENST00000465036 GRAMD4Q6IC98 578 aa6.69□□□□□ -1.34
UBR4-209ENST00000465036 NOSTRINQ8IVI9 506 aa6.69□□□□□ -1.34
UBR4-209ENST00000465036 ZC3H7AQ8IWR0 971 aaKnown RBP6.69□□□□□ -1.34
UBR4-209ENST00000465036 RTKN2Q8IZC4 609 aa6.69□□□□□ -1.34
UBR4-209ENST00000465036 THEMISQ8N1K5 641 aaPredicted RBP6.69□□□□□ -1.34
UBR4-209ENST00000465036 LPPQ93052 612 aa6.69□□□□□ -1.34
UBR4-209ENST00000465036 MPHOSPH9Q99550 1183 aa6.69□□□□□ -1.34
UBR4-209ENST00000465036 DHRS4Q9BTZ2 278 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms