RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TCP11Q8WWU5 503 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 MIEF2Q96C03 454 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 RRP36Q96EU6 259 aaKnown RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 CDK5RAP3Q96JB5 506 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 DUSP9Q99956 384 aaKnown RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 CENPHQ9H3R5 247 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 MMRN2Q9H8L6 949 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 HOMER3Q9NSC5 361 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 RBM12Q9NTZ6 932 aaKnown RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 AGPAT5Q9NUQ2 364 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 SAMD15Q9P1V8 674 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 ARPP21Q9UBL0 812 aaPredicted RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 RASAL2Q9UJF2 1139 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 INTUQ9ULD6 942 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 NFU1Q9UMS0 254 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 PLAAQ9Y263 795 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 PCDHB11Q9Y5F2 797 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 LAMB1P07942 1786 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 KIF13BQ9NQT8 1826 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 ZNF233A6NK53 670 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 CCDC169A6NNP5 214 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 MYO1FO00160 1098 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 KLRC4O43908 158 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 ABL1P00519 1130 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 MYBP10242 640 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 SMARCA1P28370 1054 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 EPS15P42566 896 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 ZNF131P52739 623 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 NPEPPSP55786 919 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 GUCY1A3Q02108 690 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 CYP27A1Q02318 531 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 BYSLQ13895 437 aaKnown RBP7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 ASIC2Q16515 512 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 SLC18A3Q16572 532 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 MEI1Q5TIA1 1274 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 KLHDC7AQ5VTJ3 777 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 TAOK1Q7L7X3 1001 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 PRICKLE2Q7Z3G6 844 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 NLRP10Q86W26 655 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 DGKHQ86XP1 1220 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 CEP57Q86XR8 500 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 LCORLQ8N3X6 602 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 MAB21L3Q8N8X9 362 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 USP38Q8NB14 1042 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 CHMP6Q96FZ7 201 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 FAM89AQ96GI7 184 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 SEC16BQ96JE7 1060 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 CNTNAP3BQ96NU0 1288 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 PSMD1Q99460 953 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 ZKSCAN3Q9BRR0 538 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 TLR10Q9BXR5 811 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 COL25A1Q9BXS0 654 aaPredicted RBP7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 CNTNAP3Q9BZ76 1288 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 CRNKL1Q9BZJ0 848 aaKnown RBP7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 TRIM9Q9C026 710 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 TAOK3Q9H2K8 898 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 C6orf50Q9HD87 102 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 ATP8A2Q9NTI2 1148 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 TMOD3Q9NYL9 352 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 ARHGAP20Q9P2F6 1191 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 SIK3Q9Y2K2 1263 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 UTP11Q9Y3A2 253 aaKnown RBP7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 ATP6V0A2Q9Y487 856 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 CAPN6Q9Y6Q1 641 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 ATAD5Q96QE3 1844 aa7.85□□□□□ -1.15
CLSTN1-204ENST00000464286 MYH10P35580 1976 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 A0A0A6YYK5 440 aaPredicted RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 TRIM49BA6NDI0 452 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 CCT8L1PA6NM43 557 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 MGRN1O60291 552 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 BUB1BO60566 1050 aaPredicted RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 KRT14P02533 472 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 TFRCP02786 760 aaKnown RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 CASP1P29466 404 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 GPC1P35052 558 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 CARSP49589 748 aaKnown RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 ZC3H6P61129 1189 aaKnown RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 HDLBPQ00341 1268 aaKnown RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 FKBP3Q00688 224 aaKnown RBP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 SLC7A5Q01650 507 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 RASSF7Q02833 373 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 RASGRF1Q13972 1273 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 NONOQ15233 471 aaKnown RBP eCLIP7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 CCDC152Q4G0S7 254 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 SBK1Q52WX2 424 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 PARP10Q53GL7 1025 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 CAVIN4Q5BKX8 364 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 MIIPQ5JXC2 388 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 SOGA3Q5TF21 947 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 KCTD16Q68DU8 428 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 ANKRD40Q6AI12 368 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 PI16Q6UXB8 463 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 STAG2Q8N3U4 1231 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 TEX9Q8N6V9 391 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 C4orf32Q8N8J7 132 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 CFAP61Q8NHU2 1237 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 HDAC7Q8WUI4 952 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 ANKS1AQ92625 1134 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 STAMQ92783 540 aa7.84□□□□□ -1.15
CLSTN1-204ENST00000464286 HVCN1Q96D96 273 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms