RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 C17orf99Q6UX52 265 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 PLEKHH3Q7Z736 793 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 TMTC1Q8IUR5 882 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 KCTD17Q8N5Z5 321 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 BANK1Q8NDB2 785 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 NEK9Q8TD19 979 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 ATRIPQ8WXE1 791 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 ARID3AQ99856 593 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 LXNQ9BS40 222 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 TUBGCP2Q9BSJ2 902 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 LRRC27Q9C0I9 530 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 BCAS3Q9H6U6 928 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 ZFYVE28Q9HCC9 887 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 WRAP73Q9P2S5 460 aaPredicted RBP16.05■□□□□ 0.16
COL5A1-205ENST00000464187 NFASCO94856 1347 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 PCNTO95613 3336 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 LOC102724159A0A0B4J2E5 919 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 WDR64B1ANS9 1081 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 P4HBP07237 508 aaKnown RBP16.05■□□□□ 0.16
COL5A1-205ENST00000464187 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
COL5A1-205ENST00000464187 SFNP31947 248 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 KRT9P35527 623 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 JAK3P52333 1124 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 SLC12A3P55017 1021 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 EHHADHQ08426 723 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 PWP2Q15269 919 aaKnown RBP16.05■□□□□ 0.16
COL5A1-205ENST00000464187 ELF2Q15723 593 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 ZNF746Q6NUN9 644 aaPredicted RBP16.05■□□□□ 0.16
COL5A1-205ENST00000464187 FAM114A1Q8IWE2 563 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 MORC4Q8TE76 937 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 DDX12PQ92771 950 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 EEF2KMTQ96G04 330 aa16.05■□□□□ 0.16
COL5A1-205ENST00000464187 JPH1Q9HDC5 661 aaPredicted RBP16.05■□□□□ 0.16
COL5A1-205ENST00000464187 TTC26A0AVF1 554 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 ASB14A6NK59 587 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 PES1O00541 588 aaKnown RBP16.04■□□□□ 0.16
COL5A1-205ENST00000464187 URI1O94763 535 aaPredicted RBP16.04■□□□□ 0.16
COL5A1-205ENST00000464187 CASQ1P31415 396 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 DNM2P50570 870 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 NOGQ13253 232 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 CRHR2Q13324 411 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 CYP26C1Q6V0L0 522 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 DPP9Q86TI2 863 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 SYT2Q8N9I0 419 aaPredicted RBP16.04■□□□□ 0.16
COL5A1-205ENST00000464187 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 SENP7Q9BQF6 1050 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 CCDC94Q9BW85 323 aaPredicted RBP16.04■□□□□ 0.16
COL5A1-205ENST00000464187 CREBZFQ9NS37 354 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 CGNQ9P2M7 1197 aaKnown RBP16.04■□□□□ 0.16
COL5A1-205ENST00000464187 SLC9A2Q9UBY0 812 aa16.04■□□□□ 0.16
COL5A1-205ENST00000464187 SORBS3O60504 671 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 ECM2O94769 699 aaPredicted RBP16.03■□□□□ 0.16
COL5A1-205ENST00000464187 DEFB115Q30KQ5 88 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 MIIPQ5JXC2 388 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 ARMCX2Q7L311 632 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 CYFIP1Q7L576 1253 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 SMAP1Q8IYB5 467 aaPredicted RBP16.03■□□□□ 0.16
COL5A1-205ENST00000464187 GUF1Q8N442 669 aaKnown RBP16.03■□□□□ 0.16
COL5A1-205ENST00000464187 ACRBPQ8NEB7 543 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 DNAJC19Q96DA6 116 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 BHMT2Q9H2M3 363 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 RASSF10A6NK89 507 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 ZBTB39O15060 712 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 NKRFO15226 690 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL5A1-205ENST00000464187 EYA4O95677 639 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 TGFB3P10600 412 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 IDEP14735 1019 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 CYP11B2P19099 503 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 UBA1P22314 1058 aaKnown RBP16.03■□□□□ 0.16
COL5A1-205ENST00000464187 MTIF2P46199 727 aaKnown RBP16.03■□□□□ 0.16
COL5A1-205ENST00000464187 APLP1P51693 650 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 SP4Q02446 784 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 GPBP1Q86WP2 473 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 FBXO16Q8IX29 292 aaPredicted RBP16.03■□□□□ 0.16
COL5A1-205ENST00000464187 RDM1Q8NG50 284 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 NACC1Q96RE7 527 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 DNAJC7Q99615 494 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 TTYH3Q9C0H2 523 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 ZSWIM4Q9H7M6 989 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 LZTFL1Q9NQ48 299 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 BMP2KQ9NSY1 1161 aaPredicted RBP16.03■□□□□ 0.16
COL5A1-205ENST00000464187 CAPN11Q9UMQ6 739 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 PCDHA10Q9Y5I2 948 aa16.03■□□□□ 0.16
COL5A1-205ENST00000464187 CA12O43570 354 aa16.02■□□□□ 0.16
COL5A1-205ENST00000464187 AOC2O75106 756 aa16.02■□□□□ 0.16
COL5A1-205ENST00000464187 QARSP47897 775 aaKnown RBP16.02■□□□□ 0.16
COL5A1-205ENST00000464187 COASYQ13057 564 aa16.02■□□□□ 0.16
COL5A1-205ENST00000464187 PSMD2Q13200 908 aa16.02■□□□□ 0.16
COL5A1-205ENST00000464187 GLIS3Q8NEA6 775 aa16.02■□□□□ 0.16
COL5A1-205ENST00000464187 CAPNS2Q96L46 248 aa16.02■□□□□ 0.16
COL5A1-205ENST00000464187 IRX2Q9BZI1 471 aaPredicted RBP16.02■□□□□ 0.16
COL5A1-205ENST00000464187 TELO2Q9Y4R8 837 aa16.02■□□□□ 0.16
COL5A1-205ENST00000464187 SLC15A5A6NIM6 579 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 ARIH2O95376 493 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 KLK7P49862 253 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 ACTR2P61160 394 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 NEDD9Q14511 834 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 LY6KQ17RY6 165 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 ARSHQ5FYA8 562 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms