RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 RB1P06400 928 aa21.33■■□□□ 1.01
SF3A1-205ENST00000463818 CTNNB1P35222 781 aa21.33■■□□□ 1.01
SF3A1-205ENST00000463818 NFX1Q12986 1120 aaKnown RBP21.33■■□□□ 1.01
SF3A1-205ENST00000463818 BTG3Q14201 252 aaPredicted RBP21.33■■□□□ 1.01
SF3A1-205ENST00000463818 BLIDQ8IZY5 108 aa21.33■■□□□ 1.01
SF3A1-205ENST00000463818 CRIPAKQ8N1N5 446 aa21.33■■□□□ 1.01
SF3A1-205ENST00000463818 C22orf23Q9BZE7 217 aa21.33■■□□□ 1.01
SF3A1-205ENST00000463818 TMX1Q9H3N1 280 aa21.33■■□□□ 1.01
SF3A1-205ENST00000463818 DISC1Q9NRI5 854 aa21.33■■□□□ 1.01
SF3A1-205ENST00000463818 NOC2LQ9Y3T9 749 aaKnown RBP21.33■■□□□ 1.01
SF3A1-205ENST00000463818 ADGRA3Q8IWK6 1321 aa21.32■■□□□ 1
SF3A1-205ENST00000463818 RPS6KA5O75582 802 aa21.32■■□□□ 1
SF3A1-205ENST00000463818 LINC00271P0C7V0 271 aa21.32■■□□□ 1
SF3A1-205ENST00000463818 NPAS4Q8IUM7 802 aa21.32■■□□□ 1
SF3A1-205ENST00000463818 METTL13Q8N6R0 699 aa21.32■■□□□ 1
SF3A1-205ENST00000463818 SLC5A5Q92911 643 aa21.32■■□□□ 1
SF3A1-205ENST00000463818 GJA10Q969M2 543 aa21.32■■□□□ 1
SF3A1-205ENST00000463818 AIFM3Q96NN9 605 aa21.32■■□□□ 1
SF3A1-205ENST00000463818 RIT2Q99578 217 aa21.32■■□□□ 1
SF3A1-205ENST00000463818 UBE2ZQ9H832 354 aaPredicted RBP21.32■■□□□ 1
SF3A1-205ENST00000463818 NRBP2Q9NSY0 501 aa21.32■■□□□ 1
SF3A1-205ENST00000463818 RWDD3Q9Y3V2 267 aa21.32■■□□□ 1
SF3A1-205ENST00000463818 C5orf67F2Z3F1 127 aa21.31■■□□□ 1
SF3A1-205ENST00000463818 M0R2N6 131 aa21.31■■□□□ 1
SF3A1-205ENST00000463818 GAS7O60861 476 aa21.31■■□□□ 1
SF3A1-205ENST00000463818 STAG3L1P0CL83 205 aa21.31■■□□□ 1
SF3A1-205ENST00000463818 Q4G0T1 1027 aa21.31■■□□□ 1
SF3A1-205ENST00000463818 BANK1Q8NDB2 785 aa21.31■■□□□ 1
SF3A1-205ENST00000463818 TMEM40Q8WWA1 233 aa21.31■■□□□ 1
SF3A1-205ENST00000463818 CLP1Q92989 425 aaKnown RBP21.31■■□□□ 1
SF3A1-205ENST00000463818 ERVK-5Q9HDB9 667 aa21.31■■□□□ 1
SF3A1-205ENST00000463818 CEP131Q9UPN4 1083 aa21.31■■□□□ 1
SF3A1-205ENST00000463818 CYP3A7-CYP3A51PA0A087WV96 503 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 MAGEB2O15479 319 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 CHMP2AO43633 222 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 ZNF862O60290 1169 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 CYP3A7P24462 503 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 CRYBB1P53674 252 aaPredicted RBP21.3■■□□□ 1
SF3A1-205ENST00000463818 NPY5RQ15761 445 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 KIZQ2M2Z5 673 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 TIGD5Q53EQ6 642 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 TCEAL5Q5H9L2 206 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 LRCH2Q5VUJ6 765 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 GALNT17Q6IS24 598 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 DAGLBQ8NCG7 672 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 FAM167AQ96KS9 214 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 PPP1R16BQ96T49 567 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 C11orf84Q9BUA3 381 aaPredicted RBP21.3■■□□□ 1
SF3A1-205ENST00000463818 TEKT3Q9BXF9 490 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 UNC45AQ9H3U1 944 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 ST3GAL5Q9UNP4 418 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 REV3LO60673 3130 aa21.3■■□□□ 1
SF3A1-205ENST00000463818 GRM6O15303 877 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 MGEA5O60502 916 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 GPR32O75388 356 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 PSMD10O75832 226 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 TDP2O95551 362 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 VTNP04004 478 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 IBSPP21815 317 aaPredicted RBP21.29■■□□□ 1
SF3A1-205ENST00000463818 SFNP31947 248 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 SCRN1Q12765 414 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 ODR4Q5SWX8 454 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 EFCAB12Q6NXP0 572 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 FAM43BQ6ZT52 329 aaPredicted RBP21.29■■□□□ 1
SF3A1-205ENST00000463818 CMTR2Q8IYT2 770 aaKnown RBP21.29■■□□□ 1
SF3A1-205ENST00000463818 FAM177A1Q8N128 213 aaPredicted RBP21.29■■□□□ 1
SF3A1-205ENST00000463818 SLKQ9H2G2 1235 aaPredicted RBP21.29■■□□□ 1
SF3A1-205ENST00000463818 LRFN2Q9ULH4 789 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 TPCN1Q9ULQ1 816 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 KCNJ14Q9UNX9 436 aa21.29■■□□□ 1
SF3A1-205ENST00000463818 MRPL42Q9Y6G3 142 aaKnown RBP21.29■■□□□ 1
SF3A1-205ENST00000463818 COL4A4P53420 1690 aaPredicted RBP21.28■■□□□ 1
SF3A1-205ENST00000463818 TTC3P53804 2025 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 GPR182O15218 404 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 CDKL5O76039 1030 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 OATP04181 439 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 KCNA5P22460 613 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 SARSP49591 514 aaKnown RBP21.28■■□□□ 1
SF3A1-205ENST00000463818 CLCN3P51790 818 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 JAK3P52333 1124 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 LEXMQ3ZCV2 418 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 PAN2Q504Q3 1202 aaKnown RBP21.28■■□□□ 1
SF3A1-205ENST00000463818 OSMRQ99650 979 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 ADAM2Q99965 735 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 PLVAPQ9BX97 442 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 LMAN2LQ9H0V9 348 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 NSUN3Q9H649 340 aaKnown RBP21.28■■□□□ 1
SF3A1-205ENST00000463818 PCDHB7Q9Y5E2 793 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 TCF20Q9UGU0 1960 aaKnown RBP21.28■■□□□ 1
SF3A1-205ENST00000463818 COL4A6Q14031 1691 aa21.28■■□□□ 1
SF3A1-205ENST00000463818 SIP14410 1827 aa21.27■■□□□ 1
SF3A1-205ENST00000463818 NCOR1O75376 2440 aa21.27■■□□□ 1
SF3A1-205ENST00000463818 DENND3A2RUS2 1198 aa21.27■■□□□ 1
SF3A1-205ENST00000463818 PFKFB2O60825 505 aa21.27■■□□□ 1
SF3A1-205ENST00000463818 GATMP50440 423 aa21.27■■□□□ 1
SF3A1-205ENST00000463818 PRKCEQ02156 737 aa21.27■■□□□ 1
SF3A1-205ENST00000463818 NONOQ15233 471 aaKnown RBP eCLIP21.27■■□□□ 1
SF3A1-205ENST00000463818 UGCGQ16739 394 aa21.27■■□□□ 1
SF3A1-205ENST00000463818 MIER3Q7Z3K6 550 aa21.27■■□□□ 1
SF3A1-205ENST00000463818 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms