RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 KCND2Q9NZV8 630 aa15.97■□□□□ 0.15
HDAC6-213ENST00000462730 CGNQ9P2M7 1197 aaKnown RBP15.97■□□□□ 0.15
HDAC6-213ENST00000462730 LOXHD1Q8IVV2 1947 aa15.97■□□□□ 0.15
HDAC6-213ENST00000462730 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
HDAC6-213ENST00000462730 BTBD19C9JJ37 291 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 PDHXO00330 501 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 ITGBL1O95965 494 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-213ENST00000462730 ZBTB48P10074 688 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-213ENST00000462730 HOXD13P35453 343 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 COPB2P35606 906 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 QARSP47897 775 aaKnown RBP15.96■□□□□ 0.15
HDAC6-213ENST00000462730 JAK3P52333 1124 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 ERVK-9P63128 1117 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 ERVK-24P63145 666 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 KRT76Q01546 638 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 KNOP1Q1ED39 458 aaKnown RBP15.96■□□□□ 0.15
HDAC6-213ENST00000462730 BMT2Q1RMZ1 405 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 EDRF1Q3B7T1 1238 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 RAD9BQ6WBX8 426 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 REXO1L1PQ8IX06 675 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 ZC3H3Q8IXZ2 948 aaKnown RBP15.96■□□□□ 0.15
HDAC6-213ENST00000462730 IWS1Q96ST2 819 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 DESI2Q9BSY9 194 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 PARVGQ9HBI0 331 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 OLFML3Q9NRN5 406 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 CAPN11Q9UMQ6 739 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 LUC7L2Q9Y383 392 aaKnown RBP15.96■□□□□ 0.15
HDAC6-213ENST00000462730 WDR64B1ANS9 1081 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 POTEB2H3BUK9 544 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 MAFGO15525 162 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 GNA14O95837 355 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 CCNE2O96020 404 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 FSTL1Q12841 308 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 NAA30Q147X3 362 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-213ENST00000462730 GNPTABQ3T906 1256 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 SPRYD7Q5W111 196 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 CHADLQ6NUI6 762 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 NUP58Q9BVL2 599 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 ODF2LQ9ULJ1 636 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 SLC45A1Q9Y2W3 748 aa15.96■□□□□ 0.15
HDAC6-213ENST00000462730 RASSF10A6NK89 507 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 CALUO43852 315 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-213ENST00000462730 KCNA2P16389 499 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 TRIM21P19474 475 aaKnown RBP15.95■□□□□ 0.14
HDAC6-213ENST00000462730 GUCY2CP25092 1073 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 NMT1P30419 496 aaKnown RBP15.95■□□□□ 0.14
HDAC6-213ENST00000462730 ZNF131P52739 623 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 ADAM9Q13443 819 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 STXBP2Q15833 593 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 UGCGQ16739 394 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 PADI6Q6TGC4 694 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.95■□□□□ 0.14
HDAC6-213ENST00000462730 TMTC1Q8IUR5 882 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 FAM133AQ8N9E0 248 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 GTF3C2Q8WUA4 911 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-213ENST00000462730 CDHR1Q96JP9 859 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 TTYH3Q9C0H2 523 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 OGFRQ9NZT2 677 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 SEL1LQ9UBV2 794 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 DBR1Q9UK59 544 aaKnown RBP15.95■□□□□ 0.14
HDAC6-213ENST00000462730 SOWAHBA6NEL2 793 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 CETN3O15182 167 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 EIF3DO15371 548 aaKnown RBP eCLIP15.95■□□□□ 0.14
HDAC6-213ENST00000462730 HIP1RO75146 1068 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 LYPLA2O95372 231 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 SFNP31947 248 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 HUNKP57058 714 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 WDR78Q5VTH9 848 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 CYP26C1Q6V0L0 522 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 ANKRD23Q86SG2 305 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 RETREG2Q8NC44 543 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 OR8K1Q8NGG5 319 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 CCDC43Q96MW1 224 aaKnown RBP15.95■□□□□ 0.14
HDAC6-213ENST00000462730 TYW1Q9NV66 732 aaKnown RBP15.95■□□□□ 0.14
HDAC6-213ENST00000462730 ZHX1Q9UKY1 873 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-213ENST00000462730 TRAF3IP3Q9Y228 551 aa15.95■□□□□ 0.14
HDAC6-213ENST00000462730 PDXKO00764 312 aa15.94■□□□□ 0.14
HDAC6-213ENST00000462730 PGK2P07205 417 aa15.94■□□□□ 0.14
HDAC6-213ENST00000462730 NR2F2P24468 414 aa15.94■□□□□ 0.14
HDAC6-213ENST00000462730 ZNF746Q6NUN9 644 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-213ENST00000462730 MMP19Q99542 508 aa15.94■□□□□ 0.14
HDAC6-213ENST00000462730 DNAJC7Q99615 494 aa15.94■□□□□ 0.14
HDAC6-213ENST00000462730 PORCNQ9H237 461 aa15.94■□□□□ 0.14
HDAC6-213ENST00000462730 MROH8Q9H579 483 aa15.94■□□□□ 0.14
HDAC6-213ENST00000462730 SIK3Q9Y2K2 1263 aa15.94■□□□□ 0.14
HDAC6-213ENST00000462730 GOLGA6L9A6NEM1 432 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 EIF3JO75822 258 aaKnown RBP15.93■□□□□ 0.14
HDAC6-213ENST00000462730 CCDC175P0C221 793 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 EDNRBP24530 442 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 RARRES1P49788 294 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 MARSP56192 900 aaKnown RBP15.93■□□□□ 0.14
HDAC6-213ENST00000462730 PSMC5P62195 406 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 MAPK7Q13164 816 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 KCTD2Q14681 263 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 FAM178BQ8IXR5 827 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 ANKRD13CQ8N6S4 541 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 RDM1Q8NG50 284 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 ADGRG1Q9Y653 693 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 NFASCO94856 1347 aa15.93■□□□□ 0.14
HDAC6-213ENST00000462730 UBE4BO95155 1302 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms