RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 CEP250Q9BV73 2442 aa17.55■□□□□ 0.4
APP-211ENST00000462267 DENND3A2RUS2 1198 aa17.55■□□□□ 0.4
APP-211ENST00000462267 PI15O43692 258 aa17.55■□□□□ 0.4
APP-211ENST00000462267 KCNA2P16389 499 aa17.55■□□□□ 0.4
APP-211ENST00000462267 NPR3P17342 541 aa17.55■□□□□ 0.4
APP-211ENST00000462267 KRT76Q01546 638 aa17.55■□□□□ 0.4
APP-211ENST00000462267 KRT17Q04695 432 aa17.55■□□□□ 0.4
APP-211ENST00000462267 TMEM266Q2M3C6 531 aa17.55■□□□□ 0.4
APP-211ENST00000462267 ODR4Q5SWX8 454 aa17.55■□□□□ 0.4
APP-211ENST00000462267 TMC7Q7Z402 723 aa17.55■□□□□ 0.4
APP-211ENST00000462267 KIAA2013Q8IYS2 634 aa17.55■□□□□ 0.4
APP-211ENST00000462267 GPRASP2Q96D09 838 aa17.55■□□□□ 0.4
APP-211ENST00000462267 ADAM2Q99965 735 aa17.55■□□□□ 0.4
APP-211ENST00000462267 KRT23Q9C075 422 aa17.55■□□□□ 0.4
APP-211ENST00000462267 ERVK-5Q9HDB9 667 aa17.55■□□□□ 0.4
APP-211ENST00000462267 DNAH14Q0VDD8 3507 aa17.55■□□□□ 0.4
APP-211ENST00000462267 FNDC1Q4ZHG4 1894 aaPredicted RBP17.54■□□□□ 0.4
APP-211ENST00000462267 C9IYK1 514 aa17.54■□□□□ 0.4
APP-211ENST00000462267 MGEA5O60502 916 aa17.54■□□□□ 0.4
APP-211ENST00000462267 ATP9AO75110 1047 aa17.54■□□□□ 0.4
APP-211ENST00000462267 PPM1AP35813 382 aa17.54■□□□□ 0.4
APP-211ENST00000462267 SLC35G1Q2M3R5 365 aa17.54■□□□□ 0.4
APP-211ENST00000462267 ATAT1Q5SQI0 421 aa17.54■□□□□ 0.4
APP-211ENST00000462267 MRPL43Q8N983 215 aaKnown RBP17.54■□□□□ 0.4
APP-211ENST00000462267 CNTNAP3BQ96NU0 1288 aa17.54■□□□□ 0.4
APP-211ENST00000462267 CNTNAP3Q9BZ76 1288 aa17.54■□□□□ 0.4
APP-211ENST00000462267 CNNM2Q9H8M5 875 aa17.54■□□□□ 0.4
APP-211ENST00000462267 ATP6V0A4Q9HBG4 840 aa17.54■□□□□ 0.4
APP-211ENST00000462267 TMEM161AQ9NX61 479 aa17.54■□□□□ 0.4
APP-211ENST00000462267 ZBTB47Q9UFB7 747 aaPredicted RBP17.54■□□□□ 0.4
APP-211ENST00000462267 DBR1Q9UK59 544 aaKnown RBP17.54■□□□□ 0.4
APP-211ENST00000462267 RCAN3Q9UKA8 241 aa17.54■□□□□ 0.4
APP-211ENST00000462267 ACACBO00763 2458 aa17.53■□□□□ 0.4
APP-211ENST00000462267 SMIM35A0A1B0GVV1 85 aa17.53■□□□□ 0.4
APP-211ENST00000462267 RPS6KA5O75582 802 aa17.53■□□□□ 0.4
APP-211ENST00000462267 PDE4AP27815 886 aa17.53■□□□□ 0.4
APP-211ENST00000462267 PDE1AP54750 535 aa17.53■□□□□ 0.4
APP-211ENST00000462267 SMC1AQ14683 1233 aaKnown RBP17.53■□□□□ 0.4
APP-211ENST00000462267 KIAA1841Q6NSI8 718 aa17.53■□□□□ 0.4
APP-211ENST00000462267 KCNT2Q6UVM3 1135 aa17.53■□□□□ 0.4
APP-211ENST00000462267 SMARCC2Q8TAQ2 1214 aa17.53■□□□□ 0.4
APP-211ENST00000462267 ELAC1Q9H777 363 aaKnown RBP17.53■□□□□ 0.4
APP-211ENST00000462267 CYP26B1Q9NR63 512 aa17.53■□□□□ 0.4
APP-211ENST00000462267 DLL3Q9NYJ7 618 aa17.53■□□□□ 0.4
APP-211ENST00000462267 CYTH3O43739 400 aa17.52■□□□□ 0.4
APP-211ENST00000462267 CLASP2O75122 1294 aaKnown RBP17.52■□□□□ 0.4
APP-211ENST00000462267 EOMESO95936 686 aa17.52■□□□□ 0.4
APP-211ENST00000462267 FAM189BP81408 668 aa17.52■□□□□ 0.4
APP-211ENST00000462267 SEC23AQ15436 765 aa17.52■□□□□ 0.4
APP-211ENST00000462267 CUL5Q93034 780 aa17.52■□□□□ 0.4
APP-211ENST00000462267 ZNF558Q96NG5 402 aa17.52■□□□□ 0.4
APP-211ENST00000462267 TMEM117Q9H0C3 514 aa17.52■□□□□ 0.4
APP-211ENST00000462267 AZI2Q9H6S1 392 aa17.52■□□□□ 0.4
APP-211ENST00000462267 DZANK1Q9NVP4 752 aa17.52■□□□□ 0.4
APP-211ENST00000462267 SPG21Q9NZD8 308 aa17.52■□□□□ 0.4
APP-211ENST00000462267 NOC2LQ9Y3T9 749 aaKnown RBP17.52■□□□□ 0.4
APP-211ENST00000462267 C2orf71A6NGG8 1288 aa17.51■□□□□ 0.39
APP-211ENST00000462267 PIK3CDO00329 1044 aa17.51■□□□□ 0.39
APP-211ENST00000462267 GPR182O15218 404 aa17.51■□□□□ 0.39
APP-211ENST00000462267 HOXA2O43364 376 aa17.51■□□□□ 0.39
APP-211ENST00000462267 WEE2P0C1S8 567 aa17.51■□□□□ 0.39
APP-211ENST00000462267 FGFR1P11362 822 aa17.51■□□□□ 0.39
APP-211ENST00000462267 TDGQ13569 410 aa17.51■□□□□ 0.39
APP-211ENST00000462267 BMS1Q14692 1282 aaKnown RBP17.51■□□□□ 0.39
APP-211ENST00000462267 GRM4Q14833 912 aa17.51■□□□□ 0.39
APP-211ENST00000462267 IMMTQ16891 758 aaKnown RBP17.51■□□□□ 0.39
APP-211ENST00000462267 OTOGLQ3ZCN5 2332 aa17.51■□□□□ 0.39
APP-211ENST00000462267 RARS2Q5T160 578 aaKnown RBP17.51■□□□□ 0.39
APP-211ENST00000462267 CYP2W1Q8TAV3 490 aa17.51■□□□□ 0.39
APP-211ENST00000462267 TRAPPC12Q8WVT3 735 aa17.51■□□□□ 0.39
APP-211ENST00000462267 ACSF2Q96CM8 615 aaPredicted RBP17.51■□□□□ 0.39
APP-211ENST00000462267 PCYT2Q99447 389 aa17.51■□□□□ 0.39
APP-211ENST00000462267 FBXL21Q9UKT6 434 aa17.51■□□□□ 0.39
APP-211ENST00000462267 ST3GAL5Q9UNP4 418 aa17.51■□□□□ 0.39
APP-211ENST00000462267 ITGB5P18084 799 aa17.5■□□□□ 0.39
APP-211ENST00000462267 USP17L6PQ6QN14 398 aa17.5■□□□□ 0.39
APP-211ENST00000462267 MTHFD1LQ6UB35 978 aa17.5■□□□□ 0.39
APP-211ENST00000462267 PLPPR4Q7Z2D5 763 aa17.5■□□□□ 0.39
APP-211ENST00000462267 SIX5Q8N196 739 aa17.5■□□□□ 0.39
APP-211ENST00000462267 LRRC43Q8N309 656 aa17.5■□□□□ 0.39
APP-211ENST00000462267 DUSP12Q9UNI6 340 aa17.5■□□□□ 0.39
APP-211ENST00000462267 GINS2Q9Y248 185 aa17.5■□□□□ 0.39
APP-211ENST00000462267 LOXHD1Q8IVV2 1947 aa17.5■□□□□ 0.39
APP-211ENST00000462267 LAMA4Q16363 1823 aa17.49■□□□□ 0.39
APP-211ENST00000462267 BAZ2BQ9UIF8 2168 aaKnown RBP17.49■□□□□ 0.39
APP-211ENST00000462267 MEIS2O14770 477 aa17.49■□□□□ 0.39
APP-211ENST00000462267 MAFGO15525 162 aa17.49■□□□□ 0.39
APP-211ENST00000462267 ARP10275 920 aa17.49■□□□□ 0.39
APP-211ENST00000462267 MTMR1Q13613 665 aa17.49■□□□□ 0.39
APP-211ENST00000462267 PLCB4Q15147 1175 aa17.49■□□□□ 0.39
APP-211ENST00000462267 ZC3H14Q6PJT7 736 aaKnown RBP17.49■□□□□ 0.39
APP-211ENST00000462267 LRRC55Q6ZSA7 311 aa17.49■□□□□ 0.39
APP-211ENST00000462267 C12orf76Q8N812 135 aaPredicted RBP17.49■□□□□ 0.39
APP-211ENST00000462267 RUBCNQ92622 972 aa17.49■□□□□ 0.39
APP-211ENST00000462267 CASD1Q96PB1 797 aa17.49■□□□□ 0.39
APP-211ENST00000462267 HINFPQ9BQA5 517 aa17.49■□□□□ 0.39
APP-211ENST00000462267 JPH1Q9HDC5 661 aaPredicted RBP17.49■□□□□ 0.39
APP-211ENST00000462267 PCDHB15Q9Y5E8 787 aa17.49■□□□□ 0.39
APP-211ENST00000462267 R4GN57 208 aa17.49■□□□□ 0.39
APP-211ENST00000462267 CACNA1GO43497 2377 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms