RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 PTPN21Q16825 1174 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 DUSP28Q4G0W2 176 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 LRRC8DQ7L1W4 858 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 FBXO11Q86XK2 927 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 MYOCDQ8IZQ8 938 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 CEP120Q8N960 986 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 CAGE1Q8TC20 777 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 THAP11Q96EK4 314 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 DYNLL2Q96FJ2 89 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 CHAMP1Q96JM3 812 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 NUP88Q99567 741 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 DSCC1Q9BVC3 393 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 PHF7Q9BWX1 381 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 IL25Q9H293 177 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 ZNF287Q9HBT7 754 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 ANO2Q9NQ90 1003 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 INCENPQ9NQS7 918 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 CLEC1BQ9P126 229 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 SWAP70Q9UH65 585 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 PCDHB9Q9Y5E1 797 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 GREB1LQ9C091 1923 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 H3BRB1 525 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 ZNF213O14771 459 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 PRMT3O60678 531 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 KPNA6O60684 536 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 NR1I2O75469 434 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 UPP2O95045 317 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 REC8O95072 547 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 LMNAP02545 664 aaKnown RBP6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 CKBP12277 381 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 CDK8P49336 464 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 CPT1AP50416 773 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 HAND2P61296 217 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 PTH1RQ03431 593 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 PDE4BQ07343 736 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 COASYQ13057 564 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 IMMTQ16891 758 aaKnown RBP6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 RSPO4Q2I0M5 234 aaPredicted RBP6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 C16orf86Q6ZW13 317 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 ZBTB33Q86T24 672 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 FBXO16Q8IX29 292 aaPredicted RBP6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 ARMC2Q8NEN0 867 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 CCDC17Q96LX7 622 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 DRC1Q96MC2 740 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 YME1L1Q96TA2 773 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 WDR11Q9BZH6 1224 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 TSPYL1Q9H0U9 437 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 LMAN2LQ9H0V9 348 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 TUT1Q9H6E5 874 aaKnown RBP6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 KANSL2Q9H9L4 492 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 MKNK2Q9HBH9 465 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 TOMM22Q9NS69 142 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 HOMER2Q9NSB8 354 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 TMEM51Q9NW97 253 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 USP15Q9Y4E8 981 aaPredicted RBP6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 ZMYM6O95789 1325 aa6.9□□□□□ -1.3
SMARCC1-204ENST00000462198 PRDM1O75626 825 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 RB1P06400 928 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 BMPR1AP36894 532 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 SEC13P55735 322 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 TAGLNQ01995 201 aaKnown RBP6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 ZNF211Q13398 564 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 BECN1Q14457 450 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 TSGA10IPQ3SY00 556 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 BRDTQ58F21 947 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 RRP12Q5JTH9 1297 aaKnown RBP6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 GDF6Q6KF10 455 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 MFSD6Q6ZSS7 791 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 ZNF444Q8N0Y2 327 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 SMRP1Q8NCR6 262 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 OR6J1Q8NGC5 347 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 DHX38Q92620 1227 aaKnown RBP6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 MAP4K1Q92918 833 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 TOP1MTQ969P6 601 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 KIFC2Q96AC6 838 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 CTAGE1Q96RT6 745 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 LSG1Q9H089 658 aaKnown RBP6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 SEMA4AQ9H3S1 761 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 RNF41Q9H4P4 317 aaPredicted RBP6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 YY1AP1Q9H869 796 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 SLC38A10Q9HBR0 1119 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 VTA1Q9NP79 307 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 ANAPC4Q9UJX5 808 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 RBM8AQ9Y5S9 174 aaKnown RBP6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 RALGAPA2Q2PPJ7 1873 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 MYH6P13533 1939 aa6.89□□□□□ -1.31
SMARCC1-204ENST00000462198 GPR179Q6PRD1 2367 aa6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 OTOGLQ3ZCN5 2332 aa6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 F5H6K3 240 aa6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 RANBP6O60518 1105 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 LGR5O75473 907 aa6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 CSPG5O95196 566 aa6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 CCNYL3P0C7X3 344 aa6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 TSPY3P0CV98 308 aa6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 TSPY8P0CW00 308 aa6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 PCP11498 1178 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 XRCC6P12956 609 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 CTNNB1P35222 781 aa6.88□□□□□ -1.31
SMARCC1-204ENST00000462198 CLCN5P51795 746 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms