RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 ANKRD13AQ8IZ07 590 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 GUF1Q8N442 669 aaKnown RBP13.7□□□□□ -0.22
COL4A6-204ENST00000461897 SECISBP2LQ93073 1101 aaKnown RBP13.7□□□□□ -0.22
COL4A6-204ENST00000461897 SNX12Q9UMY4 172 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 KIAA1024Q9UPX6 916 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 RABGAP1Q9Y3P9 1069 aa13.7□□□□□ -0.22
COL4A6-204ENST00000461897 E9PMD0 336 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 PDE2AO00408 941 aaPredicted RBP13.69□□□□□ -0.22
COL4A6-204ENST00000461897 EML1O00423 815 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 ATP2A1O14983 1001 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 PJA2O43164 708 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 SRGAP2O75044 1071 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 ARP10275 920 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 RPA1P27694 616 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 LRRC63Q05C16 580 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 PPATQ06203 517 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 EHHADHQ08426 723 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 SPA17Q15506 151 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 MAN2A1Q16706 1144 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 LRCH2Q5VUJ6 765 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 NSMFQ6X4W1 530 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 RNF207Q6ZRF8 634 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 OTOP1Q7RTM1 612 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 CREG2Q8IUH2 290 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 CCDC102AQ96A19 550 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 OTUD5Q96G74 571 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 CCDC42Q96M95 316 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 TAAR1Q96RJ0 339 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 MXRA8Q9BRK3 442 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 TFR2Q9UP52 801 aa13.69□□□□□ -0.22
COL4A6-204ENST00000461897 LCTP09848 1927 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 A0A0G2JLL6 359 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-204ENST00000461897 SPDYE5A6NIY4 337 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 USO1O60763 962 aaKnown RBP13.68□□□□□ -0.22
COL4A6-204ENST00000461897 TACC1O75410 805 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 POTEJP0CG39 1038 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 IDEP14735 1019 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 MRPS9P82933 396 aaKnown RBP13.68□□□□□ -0.22
COL4A6-204ENST00000461897 PPP2R5CQ13362 524 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 PCNX4Q63HM2 1172 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 DYMQ7RTS9 669 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 PRRT2Q7Z6L0 340 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-204ENST00000461897 ERO1BQ86YB8 467 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 ERMNQ8TAM6 284 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 AENQ8WTP8 325 aaKnown RBP13.68□□□□□ -0.22
COL4A6-204ENST00000461897 TEX13BQ9BXU2 312 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 TMEM51Q9NW97 253 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 ARHGAP20Q9P2F6 1191 aa13.68□□□□□ -0.22
COL4A6-204ENST00000461897 FEZ2Q9UHY8 353 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-204ENST00000461897 RNF40O75150 1001 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 BCRP11274 1271 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 EIF2AK2P19525 551 aaKnown RBP13.67□□□□□ -0.22
COL4A6-204ENST00000461897 PSMD2Q13200 908 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-204ENST00000461897 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-204ENST00000461897 TTLL12Q14166 644 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-204ENST00000461897 PGM5Q15124 567 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 B3GNT9Q6UX72 402 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 CCDC155Q8N6L0 562 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 DDX12PQ92771 950 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 HPS3Q969F9 1004 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 DNAJC19Q96DA6 116 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 ZNF577Q9BSK1 485 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 LRRC27Q9C0I9 530 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 NDST4Q9H3R1 872 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 PXMP2Q9NR77 195 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 HOXC10Q9NYD6 342 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 SSU72P8A0A1W2PR75 194 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 IPO5O00410 1097 aaKnown RBP13.67□□□□□ -0.22
COL4A6-204ENST00000461897 PLA2G4BP0C869 781 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 TNFRSF8P28908 595 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 PSMC6P62333 389 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 CYP4A11Q02928 519 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 ASTE1Q2TB18 679 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-204ENST00000461897 LRRC55Q6ZSA7 311 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 NIPA1Q7RTP0 329 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 SRLQ86TD4 932 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 PNMA8AQ86V59 439 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-204ENST00000461897 RMDN3Q96TC7 470 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 EIF2AK1Q9BQI3 630 aaKnown RBP13.67□□□□□ -0.22
COL4A6-204ENST00000461897 POLR3CQ9BUI4 534 aaPredicted RBP13.67□□□□□ -0.22
COL4A6-204ENST00000461897 WDR11Q9BZH6 1224 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 FAM204AQ9H8W3 233 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 KCNH7Q9NS40 1196 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 FAM184BQ9ULE4 1060 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 PCDHA13Q9Y5I0 950 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 UBIAD1Q9Y5Z9 338 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 DUSP10Q9Y6W6 482 aa13.67□□□□□ -0.22
COL4A6-204ENST00000461897 RBAK-RBAKDNI3L0D1 243 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 CHMP2AO43633 222 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 GAS7O60861 476 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 TCP1P17987 556 aaKnown RBP13.66□□□□□ -0.22
COL4A6-204ENST00000461897 KIF11P52732 1056 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 SLC12A3P55017 1021 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 CYP27A1Q02318 531 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 TKFCQ3LXA3 575 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 CCDC70Q6NSX1 233 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 GADL1Q6ZQY3 521 aa13.66□□□□□ -0.22
COL4A6-204ENST00000461897 PROCA1Q8NCQ7 364 aaPredicted RBP13.66□□□□□ -0.22
COL4A6-204ENST00000461897 AFAP1L1Q8TED9 768 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms