RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 AGO3Q9H9G7 860 aaKnown RBP10.39□□□□□ -0.75
BRCA1-207ENST00000461798 ZNF302Q9NR11 478 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 VPS54Q9P1Q0 977 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 PCDHA10Q9Y5I2 948 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 TRPV2Q9Y5S1 764 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 IGSF9BQ9UPX0 1349 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 COL4A6Q14031 1691 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 EYSQ5T1H1 3165 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 CYP3A7-CYP3A51PA0A087WV96 503 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 ZBTB42B2RXF5 422 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 H3BNC9 293 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 M0R2N6 131 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 DDX39AO00148 427 aaKnown RBP10.38□□□□□ -0.75
BRCA1-207ENST00000461798 BACH1O14867 736 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 UPP2O95045 317 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 RB1P06400 928 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 PSAPP07602 524 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 CYP3A7P24462 503 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 NLRP5P59047 1200 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 ANAPC15P60006 121 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 EPC2Q52LR7 807 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 PRR16Q569H4 304 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 GALNT17Q6IS24 598 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 PDXDC2PQ6P474 469 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 CPLX2Q6PUV4 134 aaKnown RBP10.38□□□□□ -0.75
BRCA1-207ENST00000461798 TMEM192Q8IY95 271 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 KIAA0319LQ8IZA0 1049 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 MICALL1Q8N3F8 863 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 DAGLBQ8NCG7 672 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 FBXO22Q8NEZ5 403 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 RASGRP4Q8TDF6 673 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 GDPD5Q8WTR4 605 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 BBXQ8WY36 941 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-207ENST00000461798 SLC5A5Q92911 643 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 HLA-CQ95604 372 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 ZNF689Q96CS4 500 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-207ENST00000461798 UPF3BQ9BZI7 483 aaKnown RBP10.38□□□□□ -0.75
BRCA1-207ENST00000461798 FAM49AQ9H0Q0 323 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-207ENST00000461798 RC3H2Q9HBD1 1191 aaKnown RBP10.38□□□□□ -0.75
BRCA1-207ENST00000461798 PDRG1Q9NUG6 133 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 PCDHA4Q9UN74 947 aa10.38□□□□□ -0.75
BRCA1-207ENST00000461798 TRANK1O15050 2925 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-207ENST00000461798 C5orf67F2Z3F1 127 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 M0QZ92 97 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 TNFRSF10AO00220 468 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 CPLX1O14810 134 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 MSH4O15457 936 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 PPFIA3O75145 1194 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 DGKIO75912 1065 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 LINC00271P0C7V0 271 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 CD52P31358 61 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 SKIV2LQ15477 1246 aaKnown RBP10.37□□□□□ -0.75
BRCA1-207ENST00000461798 NPY5RQ15761 445 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 Q4G0T1 1027 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 MOXD1Q6UVY6 613 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 ZNF710Q8N1W2 664 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 FIBCD1Q8N539 461 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 ADAMTS19Q8TE59 1207 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 LINC01599Q8WXQ3 324 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 KAT6AQ92794 2004 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 CLP1Q92989 425 aaKnown RBP10.37□□□□□ -0.75
BRCA1-207ENST00000461798 MRPL38Q96DV4 380 aaKnown RBP10.37□□□□□ -0.75
BRCA1-207ENST00000461798 MBOAT7Q96N66 472 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 MTUS1Q9ULD2 1270 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 PADI3Q9ULW8 664 aa10.37□□□□□ -0.75
BRCA1-207ENST00000461798 MICAL3Q7RTP6 2002 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 NCOR1O75376 2440 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 WDR64B1ANS9 1081 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 MAGEB2O15479 319 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 PFKFB2O60825 505 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 C22orf31O95567 290 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 SFNP31947 248 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 BMPR1AP36894 532 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 TFF2Q03403 129 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 TMEM62Q0P6H9 643 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 GPM6BQ13491 265 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 PTPROQ16827 1216 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 B3GNT9Q6UX72 402 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 BLIDQ8IZY5 108 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 LINC01465Q8N7H1 131 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 RDM1Q8NG50 284 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 TBCKQ8TEA7 893 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 FAM167AQ96KS9 214 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 DISC1Q9NRI5 854 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 GABBR1Q9UBS5 961 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 TCEAL9Q9UHQ7 104 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 CEP131Q9UPN4 1083 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 RWDD3Q9Y3V2 267 aa10.36□□□□□ -0.75
BRCA1-207ENST00000461798 ZNF862O60290 1169 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 PSMD10O75832 226 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 CDKL5O76039 1030 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 STAG3L1P0CL83 205 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 JAK3P52333 1124 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 CRYBB1P53674 252 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-207ENST00000461798 SCRN1Q12765 414 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 PAK2Q13177 524 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 COL19A1Q14993 1142 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 VARS2Q5ST30 1063 aaKnown RBP10.35□□□□□ -0.75
BRCA1-207ENST00000461798 ODR4Q5SWX8 454 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms