RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 TUSC3Q13454 348 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 BTBD8Q5XKL5 378 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 CPZQ66K79 652 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 CCSAPQ6IQ19 270 aaPredicted RBP4.04□□□□□ -1.76
HDAC6-212ENST00000461608 ZC3H14Q6PJT7 736 aaKnown RBP4.04□□□□□ -1.76
HDAC6-212ENST00000461608 MILR1Q7Z6M3 343 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 ZC3H18Q86VM9 953 aaKnown RBP4.04□□□□□ -1.76
HDAC6-212ENST00000461608 MIB1Q86YT6 1006 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 FMNL3Q8IVF7 1028 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 ZDHHC14Q8IZN3 488 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 INTS4Q96HW7 963 aaKnown RBP4.04□□□□□ -1.76
HDAC6-212ENST00000461608 TEPSINQ96N21 525 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 NUP88Q99567 741 aaPredicted RBP4.04□□□□□ -1.76
HDAC6-212ENST00000461608 ELF4Q99607 663 aaPredicted RBP4.04□□□□□ -1.76
HDAC6-212ENST00000461608 YIPF4Q9BSR8 244 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 CD244Q9BZW8 370 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 PCDH18Q9HCL0 1135 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 TCF7L1Q9HCS4 588 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 LUC7LQ9NQ29 371 aaKnown RBP4.04□□□□□ -1.76
HDAC6-212ENST00000461608 RIC8BQ9NVN3 520 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 H2AFY2Q9P0M6 372 aaPredicted RBP4.04□□□□□ -1.76
HDAC6-212ENST00000461608 FBLN5Q9UBX5 448 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 KCNG1Q9UIX4 513 aa4.04□□□□□ -1.76
HDAC6-212ENST00000461608 ST20-MTHFSA0A0A6YYL1 179 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 UBA6A0AVT1 1052 aaPredicted RBP4.03□□□□□ -1.76
HDAC6-212ENST00000461608 ZC3H12DA2A288 527 aaKnown RBP4.03□□□□□ -1.76
HDAC6-212ENST00000461608 GOLGA6CA6NDK9 693 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 GOLGA6BA6NDN3 693 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 KIF3BO15066 747 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 SGSM2O43147 1006 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 TSPAN6O43657 245 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 SNUPNO95149 360 aaKnown RBP4.03□□□□□ -1.76
HDAC6-212ENST00000461608 C4BPAP04003 597 aaKnown RBP4.03□□□□□ -1.76
HDAC6-212ENST00000461608 GOLGA6DP0CG33 693 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 MTHFD2P13995 350 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 FAHP16930 419 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 SLC9A1P19634 815 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 RECQLP46063 649 aaPredicted RBP4.03□□□□□ -1.76
HDAC6-212ENST00000461608 SSPNQ14714 243 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 TMEM132BQ14DG7 1078 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 ZNF827Q17R98 1081 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 INAVAQ3KP66 663 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 PLEKHN1Q494U1 663 aaPredicted RBP4.03□□□□□ -1.76
HDAC6-212ENST00000461608 PAN2Q504Q3 1202 aaKnown RBP4.03□□□□□ -1.76
HDAC6-212ENST00000461608 NXNQ6DKJ4 435 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 TIGD7Q6NT04 549 aaPredicted RBP4.03□□□□□ -1.76
HDAC6-212ENST00000461608 ETV3LQ6ZN32 361 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 ESPNLQ6ZVH7 1005 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 FAM126BQ8IXS8 530 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 CALML6Q8TD86 181 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 DDX11Q96FC9 970 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 C16orf92Q96LL3 132 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 WRNIP1Q96S55 665 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 FOXB1Q99853 325 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 RNF38Q9H0F5 515 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 XYLT2Q9H1B5 865 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 ZMAT4Q9H898 229 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 AASDHPPTQ9NRN7 309 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 C14orf119Q9NWQ9 140 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 SIRT5Q9NXA8 310 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 GOLGA6AQ9NYA3 693 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 FAN1Q9Y2M0 1017 aa4.03□□□□□ -1.76
HDAC6-212ENST00000461608 F8W031 263 aaPredicted RBP4.02□□□□□ -1.77
HDAC6-212ENST00000461608 DVL2O14641 736 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 AKAP10O43572 662 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 ABLIM3O94929 683 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 SCGB1D2O95969 90 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 CT47B1P0C2W7 299 aaPredicted RBP4.02□□□□□ -1.77
HDAC6-212ENST00000461608 MYBL2P10244 700 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 SDHBP21912 280 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 CCND1P24385 295 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 AOAHP28039 575 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 KRTAP10-2P60368 255 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 KIR3DS1Q14943 382 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 RAB3GAP1Q15042 981 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 FSCN1Q16658 493 aaKnown RBP4.02□□□□□ -1.77
HDAC6-212ENST00000461608 PTPN21Q16825 1174 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 SKIDA1Q1XH10 827 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 ABCB5Q2M3G0 1257 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 TTC38Q5R3I4 469 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 CATSPEREQ5SY80 951 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 ADGRF1Q5T601 910 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 CXorf57Q6NSI4 855 aaKnown RBP4.02□□□□□ -1.77
HDAC6-212ENST00000461608 ESRP1Q6NXG1 681 aaKnown RBP4.02□□□□□ -1.77
HDAC6-212ENST00000461608 RPTNQ6XPR3 784 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 TTLL7Q6ZT98 887 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 CCAR1Q8IX12 1150 aaKnown RBP4.02□□□□□ -1.77
HDAC6-212ENST00000461608 SIRT2Q8IXJ6 389 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 CHPFQ8IZ52 775 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 CBARPQ8N350 705 aaPredicted RBP4.02□□□□□ -1.77
HDAC6-212ENST00000461608 C1orf162Q8NEQ5 155 aaPredicted RBP4.02□□□□□ -1.77
HDAC6-212ENST00000461608 RSAD2Q8WXG1 361 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 HOOK2Q96ED9 719 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 TOE1Q96GM8 510 aaKnown RBP4.02□□□□□ -1.77
HDAC6-212ENST00000461608 FUBP3Q96I24 572 aaKnown RBP eCLIP4.02□□□□□ -1.77
HDAC6-212ENST00000461608 SIGLEC10Q96LC7 697 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 ORAI2Q96SN7 254 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 BDH2Q9BUT1 245 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 TRIM8Q9BZR9 551 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 ZNF552Q9H707 407 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms