RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 EFCAB14O75071 495 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 C22orf31O95567 290 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 CHRNA1P02708 482 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 TMOD1P28289 359 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 CYP4A11Q02928 519 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 SPIRE1Q08AE8 756 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 TBC1D8BQ0IIM8 1120 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 TMEM62Q0P6H9 643 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 IKBKEQ14164 716 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 CTTNQ14247 550 aaKnown RBP11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 NBR1Q14596 966 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 TMEM266Q2M3C6 531 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 RILPL1Q5EBL4 403 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 EFCAB12Q6NXP0 572 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 TPH2Q8IWU9 490 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 NEK9Q8TD19 979 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 EIF2AK1Q9BQI3 630 aaKnown RBP11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 LXNQ9BS40 222 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 NIFKQ9BYG3 293 aaKnown RBP11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 ZSWIM4Q9H7M6 989 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 RGL1Q9NZL6 768 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 PCDHB6Q9Y5E3 794 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 LOXHD1Q8IVV2 1947 aa11.87□□□□□ -0.51
TRAPPC12-213ENST00000461577 SIP14410 1827 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 ABHD14A-ACY1A0A1B0GW23 586 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 GRXCR1A8MXD5 290 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 STBD1O95210 358 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 HSP90AA1P07900 732 aaKnown RBP11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 GHRP10912 638 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 ATP2A2P16615 1042 aaKnown RBP11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 TECP42680 631 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 TOB1P50616 345 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 CLCN3P51790 818 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 PLEKHG4Q58EX7 1191 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 GPR153Q6NV75 609 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 OTUD6AQ7L8S5 288 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 C4orf19Q8IY42 314 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 KIAA0319LQ8IZA0 1049 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 DBF4BQ8NFT6 615 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 ERMNQ8TAM6 284 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 APBB2Q92870 758 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 MAP7D2Q96T17 732 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 SLC9A7Q96T83 725 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 IFIH1Q9BYX4 1025 aaKnown RBP11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 CELF4Q9BZC1 486 aaKnown RBP11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 SUGCTQ9HAC7 445 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 MSRAQ9UJ68 235 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 AKT3Q9Y243 479 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 GINS2Q9Y248 185 aa11.86□□□□□ -0.51
TRAPPC12-213ENST00000461577 GBF1Q92538 1859 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 TMEM150BA6NC51 233 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 POTEMA6NI47 508 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 LAD1O00515 517 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 SLITRK3O94933 977 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 DNM2P50570 870 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 WDR5P61964 334 aaKnown RBP11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 PTGDRQ13258 359 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 LPIN1Q14693 890 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 TARBP2Q15633 366 aaKnown RBP11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 RAB30Q15771 203 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 TCTN1Q2MV58 587 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 FBXO47Q5MNV8 452 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 ZNF697Q5TEC3 545 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 PLA2G4FQ68DD2 849 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 FAM109BQ6ICB4 259 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 TSHZ1Q6ZSZ6 1077 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 ANO5Q75V66 913 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 BRAPQ7Z569 592 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 LRRC71Q8N4P6 559 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 USP38Q8NB14 1042 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 PHOSPHO2Q8TCD6 241 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 CEP170P1Q96L14 293 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 CCDC43Q96MW1 224 aaKnown RBP11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 PPP1R16BQ96T49 567 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 JPH2Q9BR39 696 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 SH2D3AQ9BRG2 576 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 RAB34Q9BZG1 259 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 CYP26B1Q9NR63 512 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 MICAL3Q7RTP6 2002 aa11.85□□□□□ -0.51
TRAPPC12-213ENST00000461577 RANBP2P49792 3224 aaKnown RBP11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 AMHP03971 560 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 VTNP04004 478 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 SYT1P21579 422 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 YWHABP31946 246 aaKnown RBP11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 NPEPPSP55786 919 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 XKR9Q5GH70 373 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 ODR4Q5SWX8 454 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 FERMT3Q86UX7 667 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 EXOC8Q8IYI6 725 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 ZNF710Q8N1W2 664 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 C4orf32Q8N8J7 132 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 TIFAQ96CG3 184 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 ZBED2Q9BTP6 218 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 PBX4Q9BYU1 374 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 OSBPL7Q9BZF2 842 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 TUFT1Q9NNX1 390 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 WRAP73Q9P2S5 460 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 PPME1Q9Y570 386 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 STK24Q9Y6E0 443 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms