RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 CHMP2AO43633 222 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 EIF5BO60841 1220 aaKnown RBP15.77■□□□□ 0.12
USP4-206ENST00000461553 XBP1P17861 261 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 JAK3P52333 1124 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 SCRN1Q12765 414 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 ANKRD1Q15327 319 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 PTPROQ16827 1216 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 EPC2Q52LR7 807 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 TRMT1LQ7Z2T5 733 aaKnown RBP15.77■□□□□ 0.12
USP4-206ENST00000461553 FIBCD1Q8N539 461 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 ADAMTS19Q8TE59 1207 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 IL17RAQ96F46 866 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 AIFM3Q96NN9 605 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 RIT2Q99578 217 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 GINS2Q9Y248 185 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 RWDD3Q9Y3V2 267 aa15.77■□□□□ 0.12
USP4-206ENST00000461553 ARID2Q68CP9 1835 aa15.77■□□□□ 0.11
USP4-206ENST00000461553 BDP1A6H8Y1 2624 aa15.77■□□□□ 0.11
USP4-206ENST00000461553 C22orf31O95567 290 aa15.76■□□□□ 0.11
USP4-206ENST00000461553 CENPBP07199 599 aaPredicted RBP15.76■□□□□ 0.11
USP4-206ENST00000461553 SFNP31947 248 aa15.76■□□□□ 0.11
USP4-206ENST00000461553 CTNNB1P35222 781 aa15.76■□□□□ 0.11
USP4-206ENST00000461553 PRKCEQ02156 737 aa15.76■□□□□ 0.11
USP4-206ENST00000461553 TFF2Q03403 129 aa15.76■□□□□ 0.11
USP4-206ENST00000461553 NONOQ15233 471 aaKnown RBP eCLIP15.76■□□□□ 0.11
USP4-206ENST00000461553 TIGD5Q53EQ6 642 aa15.76■□□□□ 0.11
USP4-206ENST00000461553 KRT25Q7Z3Z0 450 aa15.76■□□□□ 0.11
USP4-206ENST00000461553 TMEM192Q8IY95 271 aa15.76■□□□□ 0.11
USP4-206ENST00000461553 LINC01599Q8WXQ3 324 aa15.76■□□□□ 0.11
USP4-206ENST00000461553 UHRF1Q96T88 793 aaPredicted RBP15.76■□□□□ 0.11
USP4-206ENST00000461553 RC3H2Q9HBD1 1191 aaKnown RBP15.76■□□□□ 0.11
USP4-206ENST00000461553 DISC1Q9NRI5 854 aa15.76■□□□□ 0.11
USP4-206ENST00000461553 PADI3Q9ULW8 664 aa15.76■□□□□ 0.11
USP4-206ENST00000461553 ZBTB42B2RXF5 422 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 ENPP3O14638 875 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 TDP2O95551 362 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 OATP04181 439 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 ATP4AP20648 1035 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 Q4G0T1 1027 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 ODR4Q5SWX8 454 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 MOXD1Q6UVY6 613 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 NPAS4Q8IUM7 802 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 METTL13Q8N6R0 699 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 SLC5A5Q92911 643 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 HLA-CQ95604 372 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 MAP7D2Q96T17 732 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 PPP1R16BQ96T49 567 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 TPCN1Q9ULQ1 816 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 PLXNA4Q9HCM2 1894 aa15.75■□□□□ 0.11
USP4-206ENST00000461553 CCDC194A0A1B0GVG4 234 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 H3BNC9 293 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 M0R2N6 131 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 TNFRSF10AO00220 468 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 PFKFB2O60825 505 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 RPS6KA5O75582 802 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 STAG3L1P0CL83 205 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 AK2P54819 239 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 NFX1Q12986 1120 aaKnown RBP15.74■□□□□ 0.11
USP4-206ENST00000461553 GPM6BQ13491 265 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 BTG3Q14201 252 aaPredicted RBP15.74■□□□□ 0.11
USP4-206ENST00000461553 NPY5RQ15761 445 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 TMEM266Q2M3C6 531 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 MIER3Q7Z3K6 550 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 KIAA0319LQ8IZA0 1049 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 RDM1Q8NG50 284 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 MRPL38Q96DV4 380 aaKnown RBP15.74■□□□□ 0.11
USP4-206ENST00000461553 C11orf84Q9BUA3 381 aaPredicted RBP15.74■□□□□ 0.11
USP4-206ENST00000461553 UNC45AQ9H3U1 944 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 KCNJ14Q9UNX9 436 aa15.74■□□□□ 0.11
USP4-206ENST00000461553 CYP3A7-CYP3A51PA0A087WV96 503 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 MAGEB2O15479 319 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 EDIL3O43854 480 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 VTNP04004 478 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 IBSPP21815 317 aaPredicted RBP15.73■□□□□ 0.11
USP4-206ENST00000461553 CYP3A7P24462 503 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 TMOD1P28289 359 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 KCNQ1P51787 676 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 CLCN3P51790 818 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 UGCGQ16739 394 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 INF2Q27J81 1249 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 FAM43BQ6ZT52 329 aaPredicted RBP15.73■□□□□ 0.11
USP4-206ENST00000461553 WASF1Q92558 559 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 GJA10Q969M2 543 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 OSMRQ99650 979 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 PHF20Q9BVI0 1012 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 DDX25Q9UHL0 483 aaKnown RBP15.73■□□□□ 0.11
USP4-206ENST00000461553 LRFN2Q9ULH4 789 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 AKT3Q9Y243 479 aa15.73■□□□□ 0.11
USP4-206ENST00000461553 DENND3A2RUS2 1198 aa15.72■□□□□ 0.11
USP4-206ENST00000461553 C5orf67F2Z3F1 127 aa15.72■□□□□ 0.11
USP4-206ENST00000461553 GPR182O15218 404 aa15.72■□□□□ 0.11
USP4-206ENST00000461553 PSMD10O75832 226 aa15.72■□□□□ 0.11
USP4-206ENST00000461553 DGKIO75912 1065 aa15.72■□□□□ 0.11
USP4-206ENST00000461553 KIZQ2M2Z5 673 aa15.72■□□□□ 0.11
USP4-206ENST00000461553 LETM2Q2VYF4 491 aa15.72■□□□□ 0.11
USP4-206ENST00000461553 NEK8Q86SG6 692 aa15.72■□□□□ 0.11
USP4-206ENST00000461553 CMTR2Q8IYT2 770 aaKnown RBP15.72■□□□□ 0.11
USP4-206ENST00000461553 TMEM40Q8WWA1 233 aa15.72■□□□□ 0.11
USP4-206ENST00000461553 ZNF689Q96CS4 500 aaPredicted RBP15.72■□□□□ 0.11
USP4-206ENST00000461553 TMX1Q9H3N1 280 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms