RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 GOLGA8FQ08AF8 430 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 GOLGA8DPQ0D2H9 430 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 RWDD4Q6NW29 188 aaKnown RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 HIPK4Q8NE63 616 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 HSPH1Q92598 858 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 ELAC2Q9BQ52 826 aaKnown RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 FSD1LQ9BXM9 530 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 PARD6BQ9BYG5 372 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 GPBP1L1Q9HC44 474 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 PALMDQ9NP74 551 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 CYP26B1Q9NR63 512 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 MAN1B1Q9UKM7 699 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 ABCA10Q8WWZ4 1543 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 DAB1O75553 588 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 FGAP02671 866 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 BAG6P46379 1132 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 SCNN1DP51172 638 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 FOXD4Q12950 439 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 LBRQ14739 615 aaKnown RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 CASP8Q14790 479 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 LRRC8BQ6P9F7 803 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 CATSPER1Q8NEC5 780 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 KLHL8Q9P2G9 620 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 STRIP2Q9ULQ0 834 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 HPCAL4Q9UM19 191 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 GNL1P36915 607 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 GYG1P46976 350 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 MECOMQ03112 1051 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 ZBTB33Q86T24 672 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 ZBTB38Q8NAP3 1195 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 USP6NLQ92738 828 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 ZWILCHQ9H900 591 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 DBNLQ9UJU6 430 aaKnown RBP9.62□□□□□ -0.87
BRCA1-205ENST00000461221 PLAAQ9Y263 795 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 NDUFA10O95299 355 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 CD58P19256 250 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 SCRN1Q12765 414 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 LRRC41Q15345 812 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 RRM2BQ7LG56 351 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 SSH3Q8TE77 659 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 ASNSD1Q9NWL6 643 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 SLC4A7Q9Y6M7 1214 aa9.62□□□□□ -0.87
BRCA1-205ENST00000461221 ITSN2Q9NZM3 1697 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 MAP3K15Q6ZN16 1313 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 ACSL3O95573 720 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 PCCAP05165 728 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-205ENST00000461221 ZNF18P17022 549 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 CXCR5P32302 372 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 MMS22LQ6ZRQ5 1243 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 KIAA0825Q8IV33 1275 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 ICA1LQ8NDH6 482 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 ACRBPQ8NEB7 543 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 BCS1LQ9Y276 419 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 CARMIL3Q8ND23 1372 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 ERBB4Q15303 1308 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 COBLO75128 1261 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 DEAF1O75398 565 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-205ENST00000461221 TRPC1P48995 793 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 EIF4A1P60842 406 aaKnown RBP9.61□□□□□ -0.87
BRCA1-205ENST00000461221 MXD4Q14582 209 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-205ENST00000461221 ELMOD1Q8N336 334 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 PHF21AQ96BD5 680 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 MEIS1O00470 390 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 BCAMP50895 628 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 WASHC5Q12768 1159 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 ANKS3Q6ZW76 656 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 EPM2AIP1Q7L775 607 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-205ENST00000461221 FASTKD5Q7L8L6 764 aaKnown RBP9.61□□□□□ -0.87
BRCA1-205ENST00000461221 TMC4Q7Z404 712 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 VSTM4Q8IW00 320 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 CNPY4Q8N129 248 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 MSTO1Q9BUK6 570 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 KDM4CQ9H3R0 1056 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 MOSPD1Q9UJG1 213 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 INPP5FQ9Y2H2 1132 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 BNIP3LO60238 219 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 MAGEA9P43362 315 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 TNFAIP2Q03169 654 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 KRT72Q14CN4 511 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 SUPT20HL1Q3ZLR7 823 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 LRRC31Q6UY01 552 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 TBCKQ8TEA7 893 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 RAPGEF5Q92565 580 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 ARHGEF1Q92888 912 aaKnown RBP9.61□□□□□ -0.87
BRCA1-205ENST00000461221 SPATA17Q96L03 361 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 AP1M1Q9BXS5 423 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 SMYD3Q9H7B4 428 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 KANSL2Q9H9L4 492 aa9.61□□□□□ -0.87
BRCA1-205ENST00000461221 DDX28Q9NUL7 540 aaKnown RBP9.61□□□□□ -0.87
BRCA1-205ENST00000461221 RASA4BC9J798 803 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 H0Y626 953 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 RASA4O43374 803 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 TRIM16O95361 564 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 MTERF2Q49AM1 385 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 CEP55Q53EZ4 464 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 CCDC24Q8N4L8 307 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 ACAP3Q96P50 834 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 LGR6Q9HBX8 967 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 SEL1LQ9UBV2 794 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 GRIN2AQ12879 1464 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms