RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 LTBRP36941 435 aa20.83■□□□□ 0.93
COL9A2-205ENST00000461118 SLC26A2P50443 739 aa20.83■□□□□ 0.93
COL9A2-205ENST00000461118 STAT5BP51692 787 aa20.83■□□□□ 0.93
COL9A2-205ENST00000461118 NONOQ15233 471 aaKnown RBP eCLIP20.83■□□□□ 0.93
COL9A2-205ENST00000461118 PUS10Q3MIT2 529 aaKnown RBP20.83■□□□□ 0.93
COL9A2-205ENST00000461118 TIGD5Q53EQ6 642 aa20.83■□□□□ 0.93
COL9A2-205ENST00000461118 MOXD1Q6UVY6 613 aa20.83■□□□□ 0.93
COL9A2-205ENST00000461118 KRT25Q7Z3Z0 450 aa20.83■□□□□ 0.93
COL9A2-205ENST00000461118 LMBR1Q8WVP7 490 aa20.83■□□□□ 0.93
COL9A2-205ENST00000461118 TNPO1Q92973 898 aaKnown RBP20.83■□□□□ 0.93
COL9A2-205ENST00000461118 YME1L1Q96TA2 773 aa20.83■□□□□ 0.93
COL9A2-205ENST00000461118 RC3H2Q9HBD1 1191 aaKnown RBP20.83■□□□□ 0.93
COL9A2-205ENST00000461118 C19orf67A6NJJ6 358 aa20.82■□□□□ 0.92
COL9A2-205ENST00000461118 DTNBO60941 627 aa20.82■□□□□ 0.92
COL9A2-205ENST00000461118 SSTR3P32745 418 aaPredicted RBP20.82■□□□□ 0.92
COL9A2-205ENST00000461118 ZP2Q05996 745 aa20.82■□□□□ 0.92
COL9A2-205ENST00000461118 ST3GAL1Q11201 340 aa20.82■□□□□ 0.92
COL9A2-205ENST00000461118 Q4G0T1 1027 aa20.82■□□□□ 0.92
COL9A2-205ENST00000461118 ZNF746Q6NUN9 644 aaPredicted RBP20.82■□□□□ 0.92
COL9A2-205ENST00000461118 ZSCAN31Q96LW9 406 aaPredicted RBP20.82■□□□□ 0.92
COL9A2-205ENST00000461118 MBOAT7Q96N66 472 aa20.82■□□□□ 0.92
COL9A2-205ENST00000461118 GJB4Q9NTQ9 266 aa20.82■□□□□ 0.92
COL9A2-205ENST00000461118 MBLAC1A4D2B0 266 aaPredicted RBP20.81■□□□□ 0.92
COL9A2-205ENST00000461118 RRN3P2A6NIE6 340 aa20.81■□□□□ 0.92
COL9A2-205ENST00000461118 C5orf67F2Z3F1 127 aa20.81■□□□□ 0.92
COL9A2-205ENST00000461118 DDX39AO00148 427 aaKnown RBP20.81■□□□□ 0.92
COL9A2-205ENST00000461118 MSH4O15457 936 aa20.81■□□□□ 0.92
COL9A2-205ENST00000461118 ALADP13716 330 aa20.81■□□□□ 0.92
COL9A2-205ENST00000461118 MARK3P27448 753 aa20.81■□□□□ 0.92
COL9A2-205ENST00000461118 KRT76Q01546 638 aa20.81■□□□□ 0.92
COL9A2-205ENST00000461118 PPFIA1Q13136 1202 aa20.81■□□□□ 0.92
COL9A2-205ENST00000461118 RPAINQ86UA6 219 aa20.81■□□□□ 0.92
COL9A2-205ENST00000461118 SMAP1Q8IYB5 467 aaPredicted RBP20.81■□□□□ 0.92
COL9A2-205ENST00000461118 RIT2Q99578 217 aa20.81■□□□□ 0.92
COL9A2-205ENST00000461118 IFIH1Q9BYX4 1025 aaKnown RBP20.81■□□□□ 0.92
COL9A2-205ENST00000461118 NSUN3Q9H649 340 aaKnown RBP20.81■□□□□ 0.92
COL9A2-205ENST00000461118 CHRNA1P02708 482 aa20.8■□□□□ 0.92
COL9A2-205ENST00000461118 PLCB4Q15147 1175 aa20.8■□□□□ 0.92
COL9A2-205ENST00000461118 GRIK4Q16099 956 aa20.8■□□□□ 0.92
COL9A2-205ENST00000461118 CTC1Q2NKJ3 1217 aa20.8■□□□□ 0.92
COL9A2-205ENST00000461118 MARCH8Q5T0T0 291 aa20.8■□□□□ 0.92
COL9A2-205ENST00000461118 MIS18BP1Q6P0N0 1132 aa20.8■□□□□ 0.92
COL9A2-205ENST00000461118 APBB2Q92870 758 aa20.8■□□□□ 0.92
COL9A2-205ENST00000461118 SLC5A5Q92911 643 aa20.8■□□□□ 0.92
COL9A2-205ENST00000461118 LLPHQ9BRT6 129 aaKnown RBP20.8■□□□□ 0.92
COL9A2-205ENST00000461118 CCDC194A0A1B0GVG4 234 aa20.79■□□□□ 0.92
COL9A2-205ENST00000461118 JAK2O60674 1132 aa20.79■□□□□ 0.92
COL9A2-205ENST00000461118 INSRRP14616 1297 aa20.79■□□□□ 0.92
COL9A2-205ENST00000461118 RABEP1Q15276 862 aa20.79■□□□□ 0.92
COL9A2-205ENST00000461118 INF2Q27J81 1249 aa20.79■□□□□ 0.92
COL9A2-205ENST00000461118 FAM160B1Q5W0V3 765 aa20.79■□□□□ 0.92
COL9A2-205ENST00000461118 TAF2Q6P1X5 1199 aa20.79■□□□□ 0.92
COL9A2-205ENST00000461118 CCDC60Q8IWA6 550 aaPredicted RBP20.79■□□□□ 0.92
COL9A2-205ENST00000461118 OXER1Q8TDS5 423 aa20.79■□□□□ 0.92
COL9A2-205ENST00000461118 UIMC1Q96RL1 719 aa20.79■□□□□ 0.92
COL9A2-205ENST00000461118 UPF2Q9HAU5 1272 aaKnown RBP20.79■□□□□ 0.92
COL9A2-205ENST00000461118 SH2B1Q9NRF2 756 aaPredicted RBP20.79■□□□□ 0.92
COL9A2-205ENST00000461118 PCDHA10Q9Y5I2 948 aa20.79■□□□□ 0.92
COL9A2-205ENST00000461118 MAFBQ9Y5Q3 323 aaPredicted RBP20.79■□□□□ 0.92
COL9A2-205ENST00000461118 DCXO43602 365 aa20.78■□□□□ 0.92
COL9A2-205ENST00000461118 TDP2O95551 362 aa20.78■□□□□ 0.92
COL9A2-205ENST00000461118 DLX2Q07687 328 aaPredicted RBP20.78■□□□□ 0.92
COL9A2-205ENST00000461118 MGAT3Q09327 533 aa20.78■□□□□ 0.92
COL9A2-205ENST00000461118 PPP4R3AQ6IN85 833 aa20.78■□□□□ 0.92
COL9A2-205ENST00000461118 SWSAP1Q6NVH7 229 aa20.78■□□□□ 0.92
COL9A2-205ENST00000461118 RUFY4Q6ZNE9 571 aa20.78■□□□□ 0.92
COL9A2-205ENST00000461118 ALYREFQ86V81 257 aaKnown RBP20.78■□□□□ 0.92
COL9A2-205ENST00000461118 ZNF302Q9NR11 478 aa20.78■□□□□ 0.92
COL9A2-205ENST00000461118 PRKAG3Q9UGI9 489 aa20.78■□□□□ 0.92
COL9A2-205ENST00000461118 TCEAL9Q9UHQ7 104 aa20.78■□□□□ 0.92
COL9A2-205ENST00000461118 TUBE1Q9UJT0 475 aa20.78■□□□□ 0.92
COL9A2-205ENST00000461118 PLXNA4Q9HCM2 1894 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 BACH1O14867 736 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 GRM6O15303 877 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 PSMD10O75832 226 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 PSAPP07602 524 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 NEK8Q86SG6 692 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 CCDC83Q8IWF9 413 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 ATP8B4Q8TF62 1192 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 TNFRSF25Q93038 417 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 BRMS1Q9HCU9 246 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 CLDND1Q9NY35 253 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 TRPC6Q9Y210 931 aa20.77■□□□□ 0.92
COL9A2-205ENST00000461118 TECTAO75443 2155 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 MYH9P35579 1960 aaKnown RBP20.76■□□□□ 0.91
COL9A2-205ENST00000461118 WDR64B1ANS9 1081 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 HBP1O60381 514 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 GAS7O60861 476 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 MMP1P03956 469 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 RPLP2P05387 115 aaKnown RBP20.76■□□□□ 0.91
COL9A2-205ENST00000461118 GCFC2P16383 781 aaKnown RBP20.76■□□□□ 0.91
COL9A2-205ENST00000461118 ATP4AP20648 1035 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 KRT2P35908 639 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 BMPR1AP36894 532 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 HYAL1Q12794 435 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 CAMK1Q14012 370 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 LPIN1Q14693 890 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 LRCH2Q5VUJ6 765 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 PDXDC2PQ6P474 469 aa20.76■□□□□ 0.91
COL9A2-205ENST00000461118 B3GNT9Q6UX72 402 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms