RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SLFN5Q08AF3 891 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 TMEM62Q0P6H9 643 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 SQSTM1Q13501 440 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 TTLL7Q6ZT98 887 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 SPATC1Q76KD6 591 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 THAP3Q8WTV1 239 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 ZNF512BQ96KM6 892 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 SLC6A18Q96N87 628 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 BRINP2Q9C0B6 783 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 MKRN2Q9H000 416 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 EPB41L4AQ9HCS5 686 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 TMEM260Q9NX78 707 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 RTEL1Q9NZ71 1219 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 CHPF2Q9P2E5 772 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 PFDN2Q9UHV9 154 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 ACSL6Q9UKU0 697 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 MINPP1Q9UNW1 487 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 KDM2BQ8NHM5 1336 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 DNAJC6O75061 913 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 RPS6KA4O75676 772 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 TOMM70O94826 608 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 CDR1P51861 262 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 AIMP1Q12904 312 aaKnown RBP5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 AUHQ13825 339 aaKnown RBP5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 ZYXQ15942 572 aaKnown RBP5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 HLFQ16534 295 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 C2orf27AQ580R0 203 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 UNC5AQ6ZN44 842 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 WDR63Q8IWG1 891 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 ST13P5Q8NFI4 369 aaPredicted RBP5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 PANK1Q8TE04 598 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 MZB1Q8WU39 189 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 PHAXQ9H814 394 aaKnown RBP5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 SPC25Q9HBM1 224 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 TNFRSF12AQ9NP84 129 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 GFOD1Q9NXC2 390 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 KLHL14Q9P2G3 628 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 NOP58Q9Y2X3 529 aaKnown RBP5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 C4AP0C0L4 1744 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 SOS1Q07889 1333 aaPredicted RBP5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 LTBP3Q9NS15 1303 aa5.96□□□□□ -1.46
ATPAF1-203ENST00000460928 VAMP4O75379 141 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 STARD3NLO95772 234 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 ACRP10323 421 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 VAV1P15498 845 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 SDHBP21912 280 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 AFF3P51826 1226 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 GYS2P54840 703 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 EIF5P55010 431 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 SSRP1Q08945 709 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 CBX2Q14781 532 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 TWISTNBQ3B726 338 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 MRM1Q6IN84 353 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 VHLLQ6RSH7 139 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 C16orf86Q6ZW13 317 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 EEPD1Q7L9B9 569 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 KIAA0907Q7Z7F0 614 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 TMEFF1Q8IYR6 380 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 DHRS1Q96LJ7 313 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 SLC9A7Q96T83 725 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 SUCOQ9UBS9 1254 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 TNNQ9UQP3 1299 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 PRKAB1Q9Y478 270 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 COL4A3BPQ9Y5P4 624 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 LAMB4A4D0S4 1761 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 IL16Q14005 1332 aa5.95□□□□□ -1.46
ATPAF1-203ENST00000460928 FOXD2O60548 495 aaPredicted RBP5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 GSNP06396 782 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 PRKCAP17252 672 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 GPTP24298 496 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 ANAPC15P60006 121 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 DDR1Q08345 913 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 KIR3DS1Q14943 382 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 NCAPHQ15003 741 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 FAM129CQ86XR2 697 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 TRMT2AQ8IZ69 625 aaKnown RBP5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 NLGN2Q8NFZ4 835 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 ZNF669Q96BR6 464 aaPredicted RBP5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 CDADC1Q9BWV3 514 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 XYLT2Q9H1B5 865 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 TMX1Q9H3N1 280 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 FBXL21Q9UKT6 434 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 PCDHB10Q9UN67 800 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 ZNF831Q5JPB2 1677 aa5.94□□□□□ -1.46
ATPAF1-203ENST00000460928 COL15A1P39059 1388 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 CICQ96RK0 1608 aaPredicted RBP5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 FAM86C2PA6NEL3 165 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 SHOXO15266 292 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 SASH1O94885 1247 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 CAMTA2O94983 1202 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 GYS1P13807 737 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 RFC4P35249 363 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 CYP4F8P98187 520 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 CALD1Q05682 793 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 NFIXQ14938 502 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 RTP2Q5QGT7 225 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 TBC1D9BQ66K14 1250 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 KIAA1211LQ6NV74 962 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 CRTC3Q6UUV7 619 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 COPS6Q7L5N1 327 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms