RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 TNFRSF25Q93038 417 aa10.71□□□□□ -0.69
COL6A2-207ENST00000460886 UIMC1Q96RL1 719 aa10.71□□□□□ -0.69
COL6A2-207ENST00000460886 YME1L1Q96TA2 773 aa10.71□□□□□ -0.69
COL6A2-207ENST00000460886 LRFN3Q9BTN0 628 aa10.71□□□□□ -0.69
COL6A2-207ENST00000460886 CD320Q9NPF0 282 aa10.71□□□□□ -0.69
COL6A2-207ENST00000460886 C11orf16Q9NQ32 467 aa10.71□□□□□ -0.69
COL6A2-207ENST00000460886 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
COL6A2-207ENST00000460886 IGLV3-22A0A075B6J6 115 aa10.7□□□□□ -0.7
COL6A2-207ENST00000460886 TDP2O95551 362 aa10.7□□□□□ -0.7
COL6A2-207ENST00000460886 RB1P06400 928 aa10.7□□□□□ -0.7
COL6A2-207ENST00000460886 GNL2Q13823 731 aaKnown RBP10.7□□□□□ -0.7
COL6A2-207ENST00000460886 LETM2Q2VYF4 491 aa10.7□□□□□ -0.7
COL6A2-207ENST00000460886 PUS10Q3MIT2 529 aaKnown RBP10.7□□□□□ -0.7
COL6A2-207ENST00000460886 MARCH8Q5T0T0 291 aa10.7□□□□□ -0.7
COL6A2-207ENST00000460886 NEK8Q86SG6 692 aa10.7□□□□□ -0.7
COL6A2-207ENST00000460886 TMEM192Q8IY95 271 aa10.7□□□□□ -0.7
COL6A2-207ENST00000460886 CRIPAKQ8N1N5 446 aa10.7□□□□□ -0.7
COL6A2-207ENST00000460886 CLP1Q92989 425 aaKnown RBP10.7□□□□□ -0.7
COL6A2-207ENST00000460886 AGO4Q9HCK5 861 aaKnown RBP10.7□□□□□ -0.7
COL6A2-207ENST00000460886 ERAP1Q9NZ08 941 aa10.7□□□□□ -0.7
COL6A2-207ENST00000460886 GRXCR2A6NFK2 248 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 H3BQV1 296 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 IPO5O00410 1097 aaKnown RBP10.69□□□□□ -0.7
COL6A2-207ENST00000460886 KCNA5P22460 613 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 SETQ01105 290 aaPredicted RBP10.69□□□□□ -0.7
COL6A2-207ENST00000460886 PPFIA1Q13136 1202 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 GPM6BQ13491 265 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 LPIN1Q14693 890 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 UTP14CQ5TAP6 766 aaKnown RBP10.69□□□□□ -0.7
COL6A2-207ENST00000460886 LARP1BQ659C4 914 aaKnown RBP10.69□□□□□ -0.7
COL6A2-207ENST00000460886 RUFY4Q6ZNE9 571 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 FAM43BQ6ZT52 329 aaPredicted RBP10.69□□□□□ -0.7
COL6A2-207ENST00000460886 BANK1Q8NDB2 785 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 ZNF689Q96CS4 500 aaPredicted RBP10.69□□□□□ -0.7
COL6A2-207ENST00000460886 PABPC5Q96DU9 382 aaKnown RBP10.69□□□□□ -0.7
COL6A2-207ENST00000460886 INTS4Q96HW7 963 aaKnown RBP10.69□□□□□ -0.7
COL6A2-207ENST00000460886 SDF4Q9BRK5 362 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 ZNF577Q9BSK1 485 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 LMAN2LQ9H0V9 348 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 FOXP1Q9H334 677 aaPredicted RBP10.69□□□□□ -0.7
COL6A2-207ENST00000460886 SMARCAD1Q9H4L7 1026 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 TUBE1Q9UJT0 475 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 RWDD3Q9Y3V2 267 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 SQORQ9Y6N5 450 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 C5orf42Q9H799 3197 aa10.69□□□□□ -0.7
COL6A2-207ENST00000460886 LOXHD1Q8IVV2 1947 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 KIAA1671Q9BY89 1806 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 MYO7AQ13402 2215 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 NFASCO94856 1347 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 ADGRA3Q8IWK6 1321 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 CYP3A7-CYP3A51PA0A087WV96 503 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 DDX39AO00148 427 aaKnown RBP10.68□□□□□ -0.7
COL6A2-207ENST00000460886 ENPP3O14638 875 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 CCNT1O60563 726 aaKnown RBP10.68□□□□□ -0.7
COL6A2-207ENST00000460886 UPP2O95045 317 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 HSP90AA1P07900 732 aaKnown RBP10.68□□□□□ -0.7
COL6A2-207ENST00000460886 CYP3A7P24462 503 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 ITGB3BPQ13352 177 aaPredicted RBP10.68□□□□□ -0.7
COL6A2-207ENST00000460886 GRIK4Q16099 956 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 CTC1Q2NKJ3 1217 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 Q4G0T1 1027 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 TMEM31Q5JXX7 168 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 FBXO47Q5MNV8 452 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 MCTP1Q6DN14 999 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 MOXD1Q6UVY6 613 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 TSHZ1Q6ZSZ6 1077 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 RSPH3Q86UC2 560 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 FIBCD1Q8N539 461 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 LENG9Q96B70 501 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 PCYT2Q99447 389 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
COL6A2-207ENST00000460886 JPH1Q9HDC5 661 aaPredicted RBP10.68□□□□□ -0.7
COL6A2-207ENST00000460886 SLC9A2Q9UBY0 812 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 DDX25Q9UHL0 483 aaKnown RBP10.68□□□□□ -0.7
COL6A2-207ENST00000460886 TRIOO75962 3097 aa10.68□□□□□ -0.7
COL6A2-207ENST00000460886 RRN3P2A6NIE6 340 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 MSH4O15457 936 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 DHX15O43143 795 aaKnown RBP10.67□□□□□ -0.7
COL6A2-207ENST00000460886 NCK2O43639 380 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 SLC37A4O43826 429 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 DGKIO75912 1065 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 GHRP10912 638 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 IL9P15248 144 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 GCFC2P16383 781 aaKnown RBP10.67□□□□□ -0.7
COL6A2-207ENST00000460886 ATP2B1P20020 1258 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 BMPR1AP36894 532 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 TCEAL5Q5H9L2 206 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 PPP4R3AQ6IN85 833 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 PTCRAQ6ISU1 281 aaPredicted RBP10.67□□□□□ -0.7
COL6A2-207ENST00000460886 PLPPR4Q7Z2D5 763 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 NOSTRINQ8IVI9 506 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 GJD3Q8N144 294 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 DNAJB3Q8WWF6 145 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 LINC01599Q8WXQ3 324 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 GJA10Q969M2 543 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 MBOAT7Q96N66 472 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 NAP1L4Q99733 375 aaKnown RBP10.67□□□□□ -0.7
COL6A2-207ENST00000460886 C11orf84Q9BUA3 381 aaPredicted RBP10.67□□□□□ -0.7
COL6A2-207ENST00000460886 PLVAPQ9BX97 442 aa10.67□□□□□ -0.7
COL6A2-207ENST00000460886 AGO3Q9H9G7 860 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms