RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 GULP1Q9UBP9 304 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 PNMA8BQ9ULN7 279 aaPredicted RBP3.8□□□□□ -1.8
HPS3-203ENST00000460822 MRFAP1Q9Y605 127 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 C7orf72A4D263 438 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 H7C1D1 291 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 KCNK3O14649 394 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 XPOTO43592 962 aaKnown RBP3.8□□□□□ -1.8
HPS3-203ENST00000460822 H2AFYO75367 372 aaKnown RBP3.8□□□□□ -1.8
HPS3-203ENST00000460822 ZBTB7AO95365 584 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 RBP3P10745 1247 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 KRT15P19012 456 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 SLC9A1P19634 815 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 BCL6P41182 706 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 LIMS1P48059 325 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 IRF9Q00978 393 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 LSAMPQ13449 338 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 SAFB2Q14151 953 aaKnown RBP eCLIP3.8□□□□□ -1.8
HPS3-203ENST00000460822 LRRC32Q14392 662 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 SLC9A5Q14940 896 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 ARHGAP44Q17R89 818 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 TMEM240Q5SV17 173 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 OTOP1Q7RTM1 612 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 OSTM1Q86WC4 334 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 CLIP3Q96DZ5 547 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 HSPBAP1Q96EW2 488 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 JAM3Q9BX67 310 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 RNF38Q9H0F5 515 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 MS4A5Q9H3V2 200 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 PRDM16Q9HAZ2 1276 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 ANLNQ9NQW6 1124 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 TOPORSQ9NS56 1045 aaPredicted RBP3.8□□□□□ -1.8
HPS3-203ENST00000460822 BTG4Q9NY30 223 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 CLDND1Q9NY35 253 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 GIT1Q9Y2X7 761 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 ZNF561-AS1K7EIQ3 104 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 LTFP02788 710 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 FUCA1P04066 466 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 GLI4P10075 376 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 CYP2C19P33261 490 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 JAM2P57087 298 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 FOXO4P98177 505 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 TERF2Q15554 542 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 CLUL1Q15846 466 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 FSTL4Q6MZW2 842 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 DBX2Q6ZNG2 339 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 NLRP10Q86W26 655 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 AMOTL1Q8IY63 956 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 CMTR2Q8IYT2 770 aaKnown RBP3.79□□□□□ -1.8
HPS3-203ENST00000460822 IL17RAQ96F46 866 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 ZNF700Q9H0M5 742 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 AP5M1Q9H0R1 490 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 RXFP1Q9HBX9 757 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 SMURF1Q9HCE7 757 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.79□□□□□ -1.8
HPS3-203ENST00000460822 SPO11Q9Y5K1 396 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 PMF1-BGLAPU3KQ54 211 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 IRS2Q9Y4H2 1338 aa3.79□□□□□ -1.8
HPS3-203ENST00000460822 SLC12A8A0AV02 714 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 LCHNA4D1U4 455 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 PCDHGA12O60330 932 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 IL33O95760 270 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 AMY2AP04746 511 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 ASGR2P07307 311 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 NBPF7P0C2Y1 421 aaPredicted RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 GNAT1P11488 350 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 TRIM27P14373 513 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 AMY2BP19961 511 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 FPR2P25090 351 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 GTF2A2P52657 109 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 RPL11P62913 178 aaKnown RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 KRT85P78386 507 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 HTRA3P83110 453 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 LACTBP83111 547 aaPredicted RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 PURAQ00577 322 aaKnown RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 GRM3Q14832 879 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 ZNF174Q15697 407 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 VPS72Q15906 364 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 C10orf62Q5T681 223 aaPredicted RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 IL31Q6EBC2 164 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 KIAA1958Q8N8K9 716 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 LINC01356Q8N9X3 169 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 TSPAN17Q96FV3 270 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 TMEM169Q96HH4 297 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 SCYL1Q96KG9 808 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 KCNC2Q96PR1 638 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 ELF4Q99607 663 aaPredicted RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 ARPC5LQ9BPX5 153 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 SARGQ9BW04 601 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 PCIF1Q9H4Z3 704 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 EPB41L4AQ9HCS5 686 aaPredicted RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 TOMM22Q9NS69 142 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 MARCH2Q9P0N8 246 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 RCAN3Q9UKA8 241 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 INVSQ9Y283 1065 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 ZNF652Q9Y2D9 606 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 PCDHGA9Q9Y5G4 932 aaKnown RBP3.78□□□□□ -1.8
HPS3-203ENST00000460822 PCDHGA8Q9Y5G5 932 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 PCDHGA7Q9Y5G6 932 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 PCDHGA6Q9Y5G7 932 aa3.78□□□□□ -1.8
HPS3-203ENST00000460822 PCDHGA3Q9Y5H0 932 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms