RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 EML1O00423 815 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 MYL1P05976 194 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 RFC5P40937 340 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 SYKP43405 635 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 CHMP4BP1P59074 171 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 PRKCEQ02156 737 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 PPFIA1Q13136 1202 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 ITGA7Q13683 1181 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 FAM47CQ5HY64 1035 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 CCSAPQ6IQ19 270 aaPredicted RBP12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 TAF2Q6P1X5 1199 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 SESTD1Q86VW0 696 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 CCDC60Q8IWA6 550 aaPredicted RBP12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 CCDC155Q8N6L0 562 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 GJA10Q969M2 543 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 LENG1Q96BZ8 264 aaPredicted RBP12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 ABHD8Q96I13 439 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 CEP170P1Q96L14 293 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 CLIC6Q96NY7 704 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 NIFKQ9BYG3 293 aaKnown RBP12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 C11orf49Q9H6J7 331 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 DDX19AQ9NUU7 478 aaKnown RBP12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 RGL1Q9NZL6 768 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 SEPT9Q9UHD8 586 aaPredicted RBP12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 PLXNA1Q9UIW2 1896 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 A0A1W2PQ45 241 aaPredicted RBP12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 A0A1W2PQY0 241 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 KINO60870 393 aaKnown RBP12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 PRPF40AO75400 957 aaKnown RBP12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 DGAT1O75907 488 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 EYA4O95677 639 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 MBD3O95983 291 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 ZNF286BP0CG31 522 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 MARK3P27448 753 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 ABCD1P33897 745 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 POLGP54098 1239 aaPredicted RBP12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 TBC1D8BQ0IIM8 1120 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 CTTNQ14247 550 aaKnown RBP12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 IL17AQ16552 155 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 XKR9Q5GH70 373 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 AXDND1Q5T1B0 1012 aaPredicted RBP12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 TMEM63BQ5T3F8 832 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 COL13A1Q5TAT6 717 aaPredicted RBP12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 C1orf53Q5VUE5 145 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 FAM43BQ6ZT52 329 aaPredicted RBP12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 SV2BQ7L1I2 683 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 FSIP1Q8NA03 581 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 MCPH1Q8NEM0 835 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 TCP11Q8WWU5 503 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 CCDC47Q96A33 483 aaKnown RBP12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 RNF25Q96BH1 459 aaPredicted RBP12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 EPSTI1Q96J88 318 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 HTATIP2Q9BUP3 242 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 KRTAP3-3Q9BYR6 98 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 KRTAP3-2Q9BYR7 98 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 SENP6Q9GZR1 1112 aaPredicted RBP12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 GDPD2Q9HCC8 539 aa12.28□□□□□ -0.44
SMNDC1-203ENST00000460483 CCDC85CA6NKD9 419 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 DCDC2CA8MYV0 355 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 ARVCFO00192 962 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 HAS3O00219 553 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 CTAGE5O15320 804 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 MED24O75448 989 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 KRT18P05783 430 aaKnown RBP12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 SPATA31C1P0DKV0 1188 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 HOXB1P14653 301 aaPredicted RBP12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 SCP2P22307 547 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 FAM160A1Q05DH4 1040 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 PLCB4Q15147 1175 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 NBPF20Q3BBV1 942 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 SHC4Q6S5L8 630 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 LARP4BQ92615 738 aaKnown RBP12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 TOX2Q96NM4 488 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 MAP7D2Q96T17 732 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 GTPBP4Q9BZE4 634 aaKnown RBP12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 TNMDQ9H2S6 317 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 BCAS3Q9H6U6 928 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 CYP26B1Q9NR63 512 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 SMCHD1A6NHR9 2005 aa12.27□□□□□ -0.45
SMNDC1-203ENST00000460483 LRRC37A2A6NM11 1700 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 FAM237AA0A1B0GTK4 181 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 MYADML2A6NDP7 307 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 M0QZ92 97 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 POLR2DO15514 142 aaKnown RBP12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 CAND2O75155 1236 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 SSBP05455 408 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 SMIM10L2AP0DMW4 78 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 SMIM10L2BP0DMW5 78 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 INSRRP14616 1297 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 PFKFB1P16118 471 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 CDC25AP30304 524 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 KARSQ15046 597 aaKnown RBP12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 GRIK4Q16099 956 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 SKOR2Q2VWA4 1001 aaPredicted RBP12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 TMEM119Q4V9L6 283 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 SPECC1Q5M775 1068 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 TRIM50Q86XT4 487 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 NME8Q8N427 588 aa12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 SYT2Q8N9I0 419 aaPredicted RBP12.26□□□□□ -0.45
SMNDC1-203ENST00000460483 SLC17A8Q8NDX2 589 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms