RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 HDLBPQ00341 1268 aaKnown RBP17.19■□□□□ 0.34
HDAC7-217ENST00000459625 C11orf96Q7Z7L8 435 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 SMAD5Q99717 465 aaKnown RBP17.19■□□□□ 0.34
HDAC7-217ENST00000459625 SLC7A5Q01650 507 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 MTMR1Q13613 665 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 HIF1AQ16665 826 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 TAF1BQ53T94 588 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-217ENST00000459625 ANKRD40Q6AI12 368 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 CYFIP1Q7L576 1253 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 SMAP1Q8IYB5 467 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-217ENST00000459625 IQCDQ96DY2 449 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 CCDC51Q96ER9 411 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 NFKBIL1Q9UBC1 381 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-217ENST00000459625 ZC3H4Q9UPT8 1303 aaKnown RBP17.19■□□□□ 0.34
HDAC7-217ENST00000459625 PRAMEF22A3QJZ6 481 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 AGRPO00253 132 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 TTC17Q96AE7 1141 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 EFHD1Q9BUP0 239 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 DRC3Q9H069 523 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 VPS11Q9H270 941 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 SMYD3Q9H7B4 428 aa17.19■□□□□ 0.34
HDAC7-217ENST00000459625 C6orf203Q9P0P8 240 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-217ENST00000459625 CLDN3O15551 220 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 ZNF699Q32M78 642 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 RMDN3Q96TC7 470 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 PCSK1NQ9UHG2 260 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 SUN1O94901 812 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 IFT88Q13099 833 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 SPATA1Q5VX52 437 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 CCDC90BQ9GZT6 254 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 ANTXR1Q9H6X2 564 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 ARIH2O95376 493 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 ACSL3O95573 720 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 GPC3P51654 580 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 TAF11Q15544 211 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 AGR3Q8TD06 166 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 SPATA33Q96N06 139 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 EMILIN3Q9NT22 766 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 THOC2Q8NI27 1593 aaKnown RBP17.18■□□□□ 0.34
HDAC7-217ENST00000459625 SLC35F6Q8N357 371 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 TCP11Q8WWU5 503 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 FAM213AQ9BRX8 229 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 PCDHA5Q9Y5H7 936 aa17.18■□□□□ 0.34
HDAC7-217ENST00000459625 M0QYV0 167 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 E2F5Q15329 346 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 NUDCD3Q8IVD9 361 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 SPTLC3Q9NUV7 552 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 A6NNZ2 444 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 WASHC5Q12768 1159 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 TMED1Q13445 227 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 TUBB8Q3ZCM7 444 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 SYCP2LQ5T4T6 812 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 CCNYL1Q8N7R7 359 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 P2RX5Q93086 422 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 VMP1Q96GC9 406 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 BBOX1O75936 387 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 PDIA3P30101 505 aaKnown RBP17.17■□□□□ 0.34
HDAC7-217ENST00000459625 PROSER3Q2NL68 480 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 BEST2Q8NFU1 509 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 VPS39Q96JC1 886 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 TEX12Q9BXU0 123 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 TRIM4Q9C037 500 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 TCP1P17987 556 aaKnown RBP17.17■□□□□ 0.34
HDAC7-217ENST00000459625 VEPH1Q14D04 833 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 RASSF3Q86WH2 238 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 TNPO2O14787 897 aaKnown RBP17.17■□□□□ 0.34
HDAC7-217ENST00000459625 CAPZA2P47755 286 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 RASEFQ8IZ41 740 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 SH3RF3Q8TEJ3 882 aaPredicted RBP17.17■□□□□ 0.34
HDAC7-217ENST00000459625 ELP3Q9H9T3 547 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 CACNA2D2Q9NY47 1150 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 ZNF212Q9UDV6 495 aa17.17■□□□□ 0.34
HDAC7-217ENST00000459625 CDK8P49336 464 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 NR5A1Q13285 461 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 RRM2BQ7LG56 351 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 CPVLQ9H3G5 476 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 SPDYE5A6NIY4 337 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 SYCE1LA8MT33 242 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 HSPA8P11142 646 aaKnown RBP17.16■□□□□ 0.34
HDAC7-217ENST00000459625 CCT5P48643 541 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 SPDYE7PQ495Y7 208 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 PFDN1O60925 122 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 CRKP46108 304 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 ESRRGP62508 458 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 GSDMAQ96QA5 445 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 CHL1O00533 1208 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 SLC16A4O15374 487 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 ECE2O60344 883 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 TMEM62Q0P6H9 643 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 TRIML1Q8N9V2 468 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 TTC7AQ9ULT0 858 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-217ENST00000459625 PHKA2P46019 1235 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 NUMBP49757 651 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 TRPV6Q9H1D0 765 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 FAM217BQ9NTX9 383 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-217ENST00000459625 ZNF518AQ6AHZ1 1483 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
HDAC7-217ENST00000459625 KBTBD13C9JR72 458 aa17.15■□□□□ 0.34
HDAC7-217ENST00000459625 PPP3CCP48454 512 aa17.15■□□□□ 0.34
HDAC7-217ENST00000459625 SWSAP1Q6NVH7 229 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms