RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 RRP36Q96EU6 259 aaKnown RBP12.93□□□□□ -0.34
SYNE2-207ENST00000458046 C7orf25Q9BPX7 421 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 NUP58Q9BVL2 599 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 CASP2P42575 452 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 BTDP43251 543 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 GSTO1P78417 241 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 HSP90B2PQ58FF3 399 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 IQCF2Q8IXL9 164 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 SH3TC2Q8TF17 1288 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 SRPK1Q96SB4 655 aaKnown RBP12.93□□□□□ -0.34
SYNE2-207ENST00000458046 CUEDC2Q9H467 287 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 FAM207AQ9NSI2 230 aaPredicted RBP12.93□□□□□ -0.34
SYNE2-207ENST00000458046 LRWD1Q9UFC0 647 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 SEC63Q9UGP8 760 aaKnown RBP12.93□□□□□ -0.34
SYNE2-207ENST00000458046 KIAA1551Q9HCM1 1747 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 USP17L5A8MUK1 530 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 ZNF263O14978 683 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 IDEP14735 1019 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 GNA11P29992 359 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 WDR93Q6P2C0 686 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 TEX11Q8IYF3 940 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 TTC8Q8TAM2 541 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 CEP95Q96GE4 821 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 CALML4Q96GE6 196 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 CCDC42Q96M95 316 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 LZTS2Q9BRK4 669 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 ZNF69Q9UC07 566 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 TBK1Q9UHD2 729 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 FRMPD2Q68DX3 1309 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-207ENST00000458046 CNTNAP4Q9C0A0 1308 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 ESYT3A0FGR9 886 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 SPDYE16A6NNV3 312 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-207ENST00000458046 EIF3CLB5ME19 914 aaKnown RBP12.92□□□□□ -0.34
SYNE2-207ENST00000458046 PIK3CDO00329 1044 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 PDE2AO00408 941 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-207ENST00000458046 EPHB6O15197 1021 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 CAPN2P17655 700 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 IRX5P78411 483 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-207ENST00000458046 KIF5AQ12840 1032 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 FKBP15Q5T1M5 1219 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 ZNF449Q6P9G9 518 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 FAM114A1Q8IWE2 563 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 GSPT2Q8IYD1 628 aaKnown RBP12.92□□□□□ -0.34
SYNE2-207ENST00000458046 COA7Q96BR5 231 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 EIF3CQ99613 913 aaKnown RBP12.92□□□□□ -0.34
SYNE2-207ENST00000458046 SPZ1Q9BXG8 430 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 RTFDC1Q9BY42 306 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-207ENST00000458046 GINM1Q9NU53 330 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 DCTN4Q9UJW0 460 aa12.92□□□□□ -0.34
SYNE2-207ENST00000458046 MYMKA6NI61 221 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 ARHGAP4P98171 946 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 CNNM4Q6P4Q7 775 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 SV2BQ7L1I2 683 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 C2CD5Q86YS7 1000 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 CCDC170Q8IYT3 715 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 MMRN2Q9H8L6 949 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 RTCBQ9Y3I0 505 aaKnown RBP12.91□□□□□ -0.34
SYNE2-207ENST00000458046 TUBBP07437 444 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 EIF6P56537 245 aaKnown RBP12.91□□□□□ -0.34
SYNE2-207ENST00000458046 MRPS25P82663 173 aaKnown RBP12.91□□□□□ -0.34
SYNE2-207ENST00000458046 GRB10Q13322 594 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 SPA17Q15506 151 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 ALFQ53S48 1182 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 ZNF804AQ7Z570 1209 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 REXO1Q8N1G1 1221 aaKnown RBP12.91□□□□□ -0.34
SYNE2-207ENST00000458046 EHBP1Q8NDI1 1231 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 IPCEF1Q8WWN9 437 aaPredicted RBP12.91□□□□□ -0.34
SYNE2-207ENST00000458046 UIMC1Q96RL1 719 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 ZNF287Q9HBT7 754 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 MRGBPQ9NV56 204 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 PSD3Q9NYI0 1048 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 LEMD3Q9Y2U8 911 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 ROBO3Q96MS0 1386 aa12.91□□□□□ -0.34
SYNE2-207ENST00000458046 TDP2O95551 362 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 NCAM1P13591 858 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 OSBPP22059 807 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 BPIFB3P59826 476 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 MCL1Q07820 350 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 C2orf54Q08AI8 447 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 CFAP161Q6P656 301 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 C16orf86Q6ZW13 317 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 SAMD14Q8IZD0 417 aaPredicted RBP12.9□□□□□ -0.34
SYNE2-207ENST00000458046 PHC3Q8NDX5 983 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 NEDD1Q8NHV4 660 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 MLXIPQ9HAP2 919 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 MAGEF1Q9HAY2 307 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 BLOC1S4Q9NUP1 217 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 POTEMA6NI47 508 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 SLC37A4O43826 429 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 TNFAIP3P21580 790 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 ACTN2P35609 894 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 GRAPQ13588 217 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 CALCRLQ16602 461 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 VWA3BQ502W6 1294 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 ZSCAN29Q8IWY8 852 aaPredicted RBP12.9□□□□□ -0.34
SYNE2-207ENST00000458046 ANKRD42Q8N9B4 389 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 GLIS3Q8NEA6 775 aa12.9□□□□□ -0.34
SYNE2-207ENST00000458046 GRAPLQ8TC17 118 aaPredicted RBP12.9□□□□□ -0.34
SYNE2-207ENST00000458046 RIN2Q8WYP3 895 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms