RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 RASSF3Q86WH2 238 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 RAVER2Q9HCJ3 691 aaKnown RBP21.09■□□□□ 0.97
SNX27-204ENST00000458013 SLFN14P0C7P3 912 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 TMPRSS15P98073 1019 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 EFCAB13Q8IY85 973 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 PPARGC1AQ9UBK2 798 aaKnown RBP21.09■□□□□ 0.97
SNX27-204ENST00000458013 HDAC6Q9UBN7 1215 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 SNAP23O00161 211 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 ZNF746Q6NUN9 644 aaPredicted RBP21.09■□□□□ 0.97
SNX27-204ENST00000458013 NEK9Q8TD19 979 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 ANAPC7Q9UJX3 599 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 OXER1Q8TDS5 423 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 SLITRK6Q9H5Y7 841 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 SEMA3EO15041 775 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 XPOTO43592 962 aaKnown RBP21.09■□□□□ 0.97
SNX27-204ENST00000458013 MMEP08473 750 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 FKBP3Q00688 224 aaKnown RBP21.09■□□□□ 0.97
SNX27-204ENST00000458013 MAGEF1Q9HAY2 307 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 GGT7Q9UJ14 662 aa21.09■□□□□ 0.97
SNX27-204ENST00000458013 FAM83BQ5T0W9 1011 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 GPATCH4Q5T3I0 446 aaKnown RBP21.08■□□□□ 0.97
SNX27-204ENST00000458013 AK8Q96MA6 479 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 ITM2BQ9Y287 266 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 SRPRBQ9Y5M8 271 aaKnown RBP21.08■□□□□ 0.97
SNX27-204ENST00000458013 hCG_2014768A0A024R1R8 64 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 STK25O00506 426 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 CIAO1O76071 339 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 GGCXP38435 758 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 DCTN4Q9UJW0 460 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 DNAJC12Q9UKB3 198 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 WDR62O43379 1518 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 NME3Q13232 169 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 VPS11Q9H270 941 aa21.08■□□□□ 0.97
SNX27-204ENST00000458013 QTRT2Q9H974 415 aaKnown RBP21.08■□□□□ 0.97
SNX27-204ENST00000458013 DNMT1P26358 1616 aaKnown RBP21.08■□□□□ 0.97
SNX27-204ENST00000458013 ARHGEF12Q9NZN5 1544 aa21.08■□□□□ 0.96
SNX27-204ENST00000458013 FBXW4P57775 412 aa21.08■□□□□ 0.96
SNX27-204ENST00000458013 NFX1Q12986 1120 aaKnown RBP21.08■□□□□ 0.96
SNX27-204ENST00000458013 CYB5R4Q7L1T6 521 aa21.08■□□□□ 0.96
SNX27-204ENST00000458013 SNX19Q92543 992 aa21.08■□□□□ 0.96
SNX27-204ENST00000458013 CUEDC2Q9H467 287 aa21.08■□□□□ 0.96
SNX27-204ENST00000458013 PCSK1NQ9UHG2 260 aa21.08■□□□□ 0.96
SNX27-204ENST00000458013 ESYT3A0FGR9 886 aa21.08■□□□□ 0.96
SNX27-204ENST00000458013 GCLMP48507 274 aa21.08■□□□□ 0.96
SNX27-204ENST00000458013 TTLL11Q8NHH1 800 aa21.08■□□□□ 0.96
SNX27-204ENST00000458013 WDR64B1ANS9 1081 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 IKBKBO14920 756 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 RNF25Q96BH1 459 aaPredicted RBP21.07■□□□□ 0.96
SNX27-204ENST00000458013 ESRRGP62508 458 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 RBBP7Q16576 425 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 CENPUQ71F23 418 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 TRIM42Q8IWZ5 723 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 KLHL11Q9NVR0 708 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 TCOF1Q13428 1488 aaKnown RBP21.07■□□□□ 0.96
SNX27-204ENST00000458013 CACNB2Q08289 660 aaPredicted RBP21.07■□□□□ 0.96
SNX27-204ENST00000458013 ALG13Q9NP73 1137 aaKnown RBP21.07■□□□□ 0.96
SNX27-204ENST00000458013 ANGPTL2Q9UKU9 493 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 FAM213AQ9BRX8 229 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 ABT1Q9ULW3 272 aaKnown RBP21.07■□□□□ 0.96
SNX27-204ENST00000458013 IQANK1A0A1B0GTG1 560 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 E9PMD0 336 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 SLC16A4O15374 487 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 DCAF4L1Q3SXM0 396 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 ARL8AQ96BM9 186 aa21.07■□□□□ 0.96
SNX27-204ENST00000458013 POLR3CQ9BUI4 534 aaPredicted RBP21.07■□□□□ 0.96
SNX27-204ENST00000458013 DRP2Q13474 957 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 NFRKBQ6P4R8 1299 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 SCN4BQ8IWT1 228 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 TRIML2Q8N7C3 387 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 FAM167BQ9BTA0 163 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 SLC24A3Q9HC58 644 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 POU5F1BQ06416 359 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 GLE1Q53GS7 698 aaKnown RBP21.06■□□□□ 0.96
SNX27-204ENST00000458013 C1orf228Q6PIY5 440 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 MMTAG2Q9BU76 263 aaKnown RBP21.06■□□□□ 0.96
SNX27-204ENST00000458013 LTKP29376 864 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 MKRN4PQ13434 485 aaPredicted RBP21.06■□□□□ 0.96
SNX27-204ENST00000458013 WDR11Q9BZH6 1224 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 SLC13A1Q9BZW2 595 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 SERPINB13Q9UIV8 391 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 PRPF3O43395 683 aaKnown RBP21.06■□□□□ 0.96
SNX27-204ENST00000458013 USP14P54578 494 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 RASGRF1Q13972 1273 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 PITPNM3Q9BZ71 974 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 EDEM3Q9BZQ6 932 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 GOLGA8QA0A0J9YX86 632 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 GOLGA8OA6NCC3 632 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 LRRC53A6NM62 1247 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 GOLGA8NF8WBI6 632 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 ANP32DO95626 131 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 AP1B1Q10567 949 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 KLHL8Q9P2G9 620 aaPredicted RBP21.06■□□□□ 0.96
SNX27-204ENST00000458013 ATP10DQ9P241 1426 aa21.06■□□□□ 0.96
SNX27-204ENST00000458013 NPHP3-ACAD11A0A0J9YXS1 232 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 USP27XA6NNY8 438 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 TTI1O43156 1089 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 KLC3Q6P597 504 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 SFR1Q86XK3 245 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 CRLF3Q8IUI8 442 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 MFAP3LO75121 409 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms