RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 GNAQP50148 359 aa16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 ANTXR2P58335 489 aa16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 TMEM62Q0P6H9 643 aa16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 SUGP1Q8IWZ8 645 aaKnown RBP16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 ZBTB10Q96DT7 871 aa16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 MYL10Q9BUA6 226 aa16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 CELF4Q9BZC1 486 aaKnown RBP16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 JPH1Q9HDC5 661 aaPredicted RBP16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 JADE2Q9NQC1 790 aa16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 BARX2Q9UMQ3 279 aaPredicted RBP16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 PCDHA2Q9Y5H9 948 aa16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 TAF6LQ9Y6J9 622 aa16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 PLXNA4Q9HCM2 1894 aa16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 IGSF9BQ9UPX0 1349 aa16.43■□□□□ 0.22
UPF3AP2-201ENST00000457924 PPFIA3O75145 1194 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 FOSBP53539 338 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 ZXDAP98168 799 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 CASC1Q6TDU7 716 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 MB21D2Q8IYB1 491 aaPredicted RBP16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 PRSS33Q8NF86 280 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 MICAL1Q8TDZ2 1067 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 PHF7Q9BWX1 381 aaPredicted RBP16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 TLE6Q9H808 572 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 LY9Q9HBG7 655 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 SLC9A2Q9UBY0 812 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 USP15Q9Y4E8 981 aaPredicted RBP16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 PCDHB12Q9Y5F1 795 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 WDFY4Q6ZS81 3184 aa16.42■□□□□ 0.22
UPF3AP2-201ENST00000457924 PLEKHA8P1O95397 391 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 GSPT1P15170 499 aaKnown RBP16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 IBSPP21815 317 aaPredicted RBP16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 KRT76Q01546 638 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 CBX2Q14781 532 aaPredicted RBP16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 UBE2SQ16763 222 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 VARS2Q5ST30 1063 aaKnown RBP16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 SPOUT1Q5T280 376 aaKnown RBP16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 NFXL1Q6ZNB6 911 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 NME8Q8N427 588 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 SRBD1Q8N5C6 995 aaKnown RBP16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 HS3ST6Q96QI5 342 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 PCYT2Q99447 389 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 PHOX2BQ99453 314 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 AAASQ9NRG9 546 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 PCDHA6Q9UN73 950 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 PCDHB7Q9Y5E2 793 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 PCDHA8Q9Y5H6 950 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 KDM3AQ9Y4C1 1321 aa16.41■□□□□ 0.22
UPF3AP2-201ENST00000457924 SMIM35A0A1B0GVV1 85 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 FSD2A1L4K1 749 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 GLP2RO95838 553 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 CHMLP26374 656 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 GATMP50440 423 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 STAT5BP51692 787 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 UBE3AQ05086 875 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 NFX1Q12986 1120 aaKnown RBP16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 PLCB4Q15147 1175 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 POTEGQ6S5H5 508 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 FAM43BQ6ZT52 329 aaPredicted RBP16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 PLPPR4Q7Z2D5 763 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 CMTR1Q8N1G2 835 aaKnown RBP16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 TMTC2Q8N394 836 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 TRAPPC12Q8WVT3 735 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 DDX12PQ92771 950 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 RPGRIP1Q96KN7 1286 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 SDF4Q9BRK5 362 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 PCDHGC5Q9Y5F6 944 aa16.4■□□□□ 0.22
UPF3AP2-201ENST00000457924 FNDC1Q4ZHG4 1894 aaPredicted RBP16.39■□□□□ 0.22
UPF3AP2-201ENST00000457924 POTEMA6NI47 508 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 CCDC69A6NI79 296 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 PER2O15055 1255 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 CALM1P0DP23 149 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 CALM2P0DP24 149 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 CALM3P0DP25 149 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 ATF7P17544 494 aaPredicted RBP16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 SARSP49591 514 aaKnown RBP16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 SIGLEC14Q08ET2 396 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 TMEM266Q2M3C6 531 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 MTHFD1LQ6UB35 978 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 FBXL6Q8N531 539 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 MTA3Q9BTC8 594 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 TMX1Q9H3N1 280 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 TLR9Q9NR96 1032 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 KCNH7Q9NS40 1196 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 KMT2EQ8IZD2 1858 aa16.39■□□□□ 0.21
UPF3AP2-201ENST00000457924 TBKBP1A7MCY6 615 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 PRC1O43663 620 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 SRGAP2BP0DMP2 458 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 MLLT3P42568 568 aaPredicted RBP16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 ACTR2P61160 394 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 ODR4Q5SWX8 454 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 ATP8B4Q8TF62 1192 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 NEK1Q96PY6 1258 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 CDCA3Q99618 268 aaPredicted RBP16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 MXRA8Q9BRK3 442 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 C1orf112Q9NSG2 853 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 GINS2Q9Y248 185 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 PCDHGA10Q9Y5H3 936 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 NFASCO94856 1347 aa16.38■□□□□ 0.21
UPF3AP2-201ENST00000457924 hCG_1642624A0A1W2PR95 340 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms