RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 MAP3K14Q99558 947 aa4.6□□□□□ -1.67
HMGB3P30-201ENST00000457863 SLC13A1Q9BZW2 595 aa4.6□□□□□ -1.67
HMGB3P30-201ENST00000457863 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB3P30-201ENST00000457863 ATP6V0A4Q9HBG4 840 aa4.6□□□□□ -1.67
HMGB3P30-201ENST00000457863 ANKEF1Q9NU02 776 aa4.6□□□□□ -1.67
HMGB3P30-201ENST00000457863 PDP2Q9P2J9 529 aa4.6□□□□□ -1.67
HMGB3P30-201ENST00000457863 PPARGC1AQ9UBK2 798 aaKnown RBP4.6□□□□□ -1.67
HMGB3P30-201ENST00000457863 GJD2Q9UKL4 321 aa4.6□□□□□ -1.67
HMGB3P30-201ENST00000457863 PTPN22Q9Y2R2 807 aa4.6□□□□□ -1.67
HMGB3P30-201ENST00000457863 TEX51A0A1B0GUA7 166 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 hCG_1642624A0A1W2PR95 340 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 NOTOA8MTQ0 251 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 AREL1O15033 823 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 SNUPNO95149 360 aaKnown RBP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 PYGLP06737 847 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 RPS6KB1P23443 525 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 L1CAMP32004 1257 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 GBP1P32455 592 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 KIF5BP33176 963 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 GALNSP34059 522 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 BPIFB3P59826 476 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 DLG4P78352 724 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 PCBP1Q15365 356 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 HSP90AB3PQ58FF7 597 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 GPRASP1Q5JY77 1395 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 FAAH2Q6GMR7 532 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 CPLX2Q6PUV4 134 aaKnown RBP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 ZNF605Q86T29 641 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 NLRX1Q86UT6 975 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 ZNF655Q8N720 491 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 COG1Q8WTW3 980 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 ZFPM2Q8WW38 1151 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 KCNN1Q92952 543 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 ATP6V1E2Q96A05 226 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 VMP1Q96GC9 406 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 RSRC1Q96IZ7 334 aaKnown RBP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 MAP6Q96JE9 813 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 SGCZQ96LD1 299 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 AIFM3Q96NN9 605 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 MENTQ9BUN1 341 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 MRPL9Q9BYD2 267 aaKnown RBP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 MTFR1LQ9H019 292 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 ASCC2Q9H1I8 757 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 UNC45AQ9H3U1 944 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 ZNF552Q9H707 407 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 SMC4Q9NTJ3 1288 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 SUCOQ9UBS9 1254 aaKnown RBP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 SEL1LQ9UBV2 794 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 SAP30BPQ9UHR5 308 aaKnown RBP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 XPO7Q9UIA9 1087 aaKnown RBP4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 GPR160Q9UJ42 338 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 GIT1Q9Y2X7 761 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 SLC4A7Q9Y6M7 1214 aa4.59□□□□□ -1.67
HMGB3P30-201ENST00000457863 SLC22A31A6NKX4 558 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 NUAK1O60285 661 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 PSPNO60542 156 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 CD4P01730 458 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 LTFP02788 710 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 APPP05067 770 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 ASGR2P07307 311 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 RAG1P15918 1043 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 CCND1P24385 295 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 CHKAP35790 457 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 KIR2DL1P43626 348 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 KIR2DL2P43627 348 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 ZNF165P49910 485 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 USP14P54578 494 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 TMPRSS15P98073 1019 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 PPFIA1Q13136 1202 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 GRM1Q13255 1194 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 GRB10Q13322 594 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 SMC1AQ14683 1233 aaKnown RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 SLC10A6Q3KNW5 377 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 PRR16Q569H4 304 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 RILPL1Q5EBL4 403 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 TMEM240Q5SV17 173 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 NBPF12Q5TAG4 269 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 ANKRD45Q5TZF3 282 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 CDCP2Q5VXM1 449 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 OVOS1Q6IE37 1185 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 ZCCHC8Q6NZY4 707 aaKnown RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 PKN3Q6P5Z2 889 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 TLDC1Q6P9B6 456 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 LILRA6Q6PI73 481 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 C4orf50Q6ZRC1 276 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 CCDC73Q6ZRK6 1079 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 FASTKD5Q7L8L6 764 aaKnown RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 DAAM2Q86T65 1068 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 LSRQ86X29 649 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 C7orf61Q8IZ16 206 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 LRRC47Q8N1G4 583 aaKnown RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 CBARPQ8N350 705 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 TAB3Q8N5C8 712 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 C19orf47Q8N9M1 422 aaKnown RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 LINC00116Q8NCU8 138 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 IPCEF1Q8WWN9 437 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 ANP32BQ92688 251 aaKnown RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 HDAC2Q92769 488 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms