RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 NEURL1BA8MQ27 555 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 SERPINI2O75830 405 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 RASSF9O75901 435 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 PSAPP07602 524 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 NR5A1Q13285 461 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 BYSLQ13895 437 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ME3Q16798 604 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ICE2Q659A1 982 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 C16orf89Q6UX73 402 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 LRRC31Q6UY01 552 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 AGGF1Q8N302 714 aaeCLIP4.3□□□□□ -1.724e-7■■■■■ 54.6
PPP1R9A-208ENST00000456331 PPM1KQ8N3J5 372 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 DNAAF3Q8N9W5 541 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 USP13Q92995 863 aaPredicted RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 HPS3Q969F9 1004 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZNF653Q96CK0 615 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 EYA1Q99502 592 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 SIKE1Q9BRV8 207 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 NBPF3Q9H094 633 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ARMT1Q9H993 441 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 TBC1D23Q9NUY8 699 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ABCA8O94911 1581 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 PTPRTO14522 1441 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZNF263O14978 683 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 KLHL2O95198 593 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 PTGDRQ13258 359 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 KPNB1Q14974 876 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 KIAA1755Q5JYT7 1200 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 DPY19L2Q6NUT2 758 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 CDKL3Q8IVW4 592 aaPredicted RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ABI1Q8IZP0 508 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 GTF3C2Q8WUA4 911 aaPredicted RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 KCNK16Q96T55 309 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 PCDHA7Q9UN72 937 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 PCDHB4Q9Y5E5 795 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 SESN1Q9Y6P5 492 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 PTCH1Q13635 1447 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 SAMD9Q5K651 1589 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 PER1O15534 1290 aaPredicted RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 TOMM70O94826 608 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 S100A5P33763 92 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 RPS8P62241 208 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 MRPS35P82673 323 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 PNOCQ13519 176 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 FAM47CQ5HY64 1035 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZMYM1Q5SVZ6 1142 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 FOXP4Q8IVH2 680 aaPredicted RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ATP11CQ8NB49 1132 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 SYMPKQ92797 1274 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 EPAS1Q99814 870 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 CCDC134Q9H6E4 229 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 SLC38A10Q9HBR0 1119 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 SYBUQ9NX95 663 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 NRBP1Q9UHY1 535 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 TPX2Q9ULW0 747 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZNF197O14709 1029 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 HNRNPDLO14979 420 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 SNUPNO95149 360 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 CFBP00751 764 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 HSPD1P10809 573 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 PMLP29590 882 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 IL6STP40189 918 aaPredicted RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 GUCY2FP51841 1108 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ADKP55263 362 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ARHGAP44Q17R89 818 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 RC3H1Q5TC82 1133 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 FRA10AC1Q70Z53 315 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 EPM2AIP1Q7L775 607 aaPredicted RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 USHBP1Q8N6Y0 703 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZNF555Q8NEP9 628 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 CCDC126Q96EE4 140 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 MRPL46Q9H2W6 279 aaKnown RBP4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 NLRC4Q9NPP4 1024 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 ST7Q9NRC1 585 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 IP6K2Q9UHH9 426 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 STAP1Q9ULZ2 295 aa4.3□□□□□ -1.72
PPP1R9A-208ENST00000456331 TADA3O75528 432 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 PDIA3P30101 505 aaKnown RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 NAA20P61599 178 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 GPC5P78333 572 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 UNC13DQ70J99 1090 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 CCNJLQ8IV13 435 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 PCYOX1LQ8NBM8 494 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 TMEM35BQ8NCS4 154 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 VPS37AQ8NEZ2 397 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 N4BP2L2Q92802 583 aaPredicted RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 CNBD2Q96M20 576 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 FGD4Q96M96 766 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 FANCLQ9NW38 375 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 TFCP2L1Q9NZI6 479 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 HPCAL4Q9UM19 191 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 UBN2Q6ZU65 1347 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 SNX2O60749 519 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 HSPA4LO95757 839 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 AGTP01019 485 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MYCLP12524 364 aaPredicted RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 PCSK2P16519 638 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 OCRLQ01968 901 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 DIXDC1Q155Q3 683 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 LONRF3Q496Y0 759 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms