RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 AP1ARQ63HQ0 302 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 PDXDC1Q6P996 788 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 KIAA1328Q86T90 577 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 GRIN3AQ8TCU5 1115 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 TRIM7Q9C029 511 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 BABAM1Q9NWV8 329 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 TMOD4Q9NZQ9 345 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 ABCF2Q9UG63 623 aa4.96□□□□□ -1.62
DEPDC1-202ENST00000456315 MAGEA13PA6NCF6 341 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 MYMKA6NI61 221 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 GCP02774 474 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 COL6A2P12110 1019 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 CTNNA1P35221 906 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 ZC3H6P61129 1189 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 LAMB3Q13751 1172 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 HLTFQ14527 1009 aaKnown RBP eCLIP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 IMMTQ16891 758 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 GKAP1Q5VSY0 366 aaPredicted RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 LLGL2Q6P1M3 1020 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 RALYLQ86SE5 291 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 FMNL3Q8IVF7 1028 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 PTPRN2Q92932 1015 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 FERMT2Q96AC1 680 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 ISCUQ9H1K1 167 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 INIPQ9NRY2 104 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 TBC1D30Q9Y2I9 924 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 SNX24Q9Y343 169 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 SVEP1Q4LDE5 3571 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 ARHGAP23Q9P227 1491 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 RTTNQ86VV8 2226 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 BCORQ6W2J9 1755 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 RNASEH1O60930 286 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 KIAA0754O94854 1291 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 RHOBTB3O94955 611 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 MMEP08473 750 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 EZRP15311 586 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 IVDP26440 423 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 ZNF658Q5TYW1 1059 aaPredicted RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 CCDC121Q6ZUS5 278 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 SPATA21Q7Z572 469 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 CPLX4Q7Z7G2 160 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 CAGE1Q8TC20 777 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 MMRN2Q9H8L6 949 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 ZNF395Q9H8N7 513 aaPredicted RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 ADGRG4Q8IZF6 3080 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 SIPA1L3O60292 1781 aaPredicted RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 STK10O94804 968 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 ZBTB7AO95365 584 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 TCP1P17987 556 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 PEX5P50542 639 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 USP46P62068 366 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 CDK17Q00537 523 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 DRP2Q13474 957 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 FAM83BQ5T0W9 1011 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 APBB1IPQ7Z5R6 666 aaPredicted RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 PRELID2Q8N945 189 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 ERLEC1Q96DZ1 483 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 TUBGCP5Q96RT8 1024 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 SH3GL3Q99963 347 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 KDM4CQ9H3R0 1056 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 EURLQ9NYK6 297 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 HAO1Q9UJM8 370 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 NAGPAQ9UK23 515 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 NENFQ9UMX5 172 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 SLIT2O94813 1529 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 RGPD5Q99666 1765 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 TCP11X1B4DZS4 312 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 DDX3XO00571 662 aaKnown RBP eCLIP4.95□□□□□ -1.625e-20■■■■□ 25.7
DEPDC1-202ENST00000456315 KCNK3O14649 394 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 MBD4O95243 580 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 MYL1P05976 194 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 VARSP26640 1264 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 TNFRSF8P28908 595 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 RANBP1P43487 201 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 CCNG1P51959 295 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 POLR2FP61218 127 aaKnown RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 ICA1Q05084 483 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 BTG3Q14201 252 aaPredicted RBP4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 WDR72Q3MJ13 1102 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 VWA3BQ502W6 1294 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 AKNAD1Q5T1N1 836 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 SMIM5Q71RC9 77 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 KIAA0825Q8IV33 1275 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 SPNS2Q8IVW8 549 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 MGARPQ8TDB4 240 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 CABLES1Q8TDN4 633 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 KLHL29Q96CT2 875 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 MAF1Q9H063 256 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 DISC1Q9NRI5 854 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 COG5Q9UP83 839 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 TNRQ92752 1358 aa4.95□□□□□ -1.62
DEPDC1-202ENST00000456315 hCG_2014768A0A024R1R8 64 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 CYP2D6P10635 497 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 SLC8A1P32418 973 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 DNM2P50570 870 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 CACNB1Q02641 598 aaPredicted RBP4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 FIGNQ5HY92 759 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 HHATQ5VTY9 493 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 DUPD1Q68J44 220 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 RFX8Q6ZV50 586 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms