RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SUPT20HL2P0C7V6 817 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 BRD2P25440 801 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 CHMLP26374 656 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 MSX1P28360 303 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 RBM25P49756 843 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 SMCPP49901 116 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 ZNF200P98182 395 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 SEC23AQ15436 765 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 STXBP2Q15833 593 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 PTGISQ16647 500 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 SLC35G1Q2M3R5 365 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 C11orf91Q3C1V1 193 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 ASPRV1Q53RT3 343 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 CCDC178Q5BJE1 867 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 ARSJQ5FYB0 599 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 TTC22Q5TAA0 569 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 KRT40Q6A162 431 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 GDF6Q6KF10 455 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 NFRKBQ6P4R8 1299 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 TMCO2Q7Z6W1 182 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 HOMER1Q86YM7 354 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 MCF2L2Q86YR7 1114 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 TREML1Q86YW5 311 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 MICALL1Q8N3F8 863 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 NSUN6Q8TEA1 469 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 KAT2BQ92831 832 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 IFT43Q96FT9 208 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 PIGSQ96S52 555 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 MPHOSPH6Q99547 160 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 UBAC1Q9BSL1 405 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 ALG1Q9BT22 464 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 KRT23Q9C075 422 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 FTOQ9C0B1 505 aaKnown RBP eCLIP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 SLC28A3Q9HAS3 691 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 AAASQ9NRG9 546 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 MAD2L2Q9UI95 211 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 DDX41Q9UJV9 622 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 DCTN4Q9UJW0 460 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 USP20Q9Y2K6 914 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 MRPL11Q9Y3B7 192 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 SLC4A7Q9Y6M7 1214 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 ABCB11O95342 1321 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 LOXHD1Q8IVV2 1947 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 TMEM265A0A087WTH1 108 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 LOC102724159A0A0B4J2E5 919 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 ANKRD33BA6NCL7 494 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 B4DLN1 442 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 IFIT3O14879 490 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 ZBTB5O15062 677 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 CYTH3O43739 400 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 FZD6O60353 706 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 MAN1A2O60476 641 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 KPNA6O60684 536 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 ARHGEF15O94989 841 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 GH1P01241 217 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 MMP3P08254 477 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 CYP21A2P08686 494 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 ZNF286BP0CG31 522 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 ATP2A2P16615 1042 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 CASTP20810 708 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 MRPL12P52815 198 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 SP2Q02086 613 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 DNM1Q05193 864 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 ARHGAP1Q07960 439 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 COL9A3Q14050 684 aaPredicted RBP5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 GPNMBQ14956 572 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 PWP2Q15269 919 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 RAB30Q15771 203 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 TCTN1Q2MV58 587 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 BRDTQ58F21 947 aaPredicted RBP5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 LRRC69Q6ZNQ3 347 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 STOX1Q6ZVD7 989 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 SPRED2Q7Z698 418 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 FCHSD1Q86WN1 690 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 SKAP1Q86WV1 359 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 DHX37Q8IY37 1157 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 IL31RAQ8NI17 732 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 GPR152Q8TDT2 470 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 PRUNE2Q8WUY3 3088 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 EDEM1Q92611 657 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 SUSD3Q96L08 255 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 CTAGE1Q96RT6 745 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 IWS1Q96ST2 819 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 MYL10Q9BUA6 226 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 AMNQ9BXJ7 453 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 SEZ6LQ9BYH1 1024 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 MTIF3Q9H2K0 278 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 CNNM2Q9H8M5 875 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 PXMP2Q9NR77 195 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 ZDHHC3Q9NYG2 299 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 RTEL1Q9NZ71 1219 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 HDAC6Q9UBN7 1215 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 PNMA2Q9UL42 364 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 TELO2Q9Y4R8 837 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 PCDHA1Q9Y5I3 950 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 UNC80Q8N2C7 3258 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 RAD50Q92878 1312 aa5.44□□□□□ -1.54
GTF3C3-208ENST00000455546 EPOPA6NHQ4 379 aa5.43□□□□□ -1.54
GTF3C3-208ENST00000455546 A6NHS1 94 aa5.43□□□□□ -1.54
GTF3C3-208ENST00000455546 E7EWF7 191 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms