RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 GGCXP38435 758 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 STAT2P52630 851 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 CACNB3P54284 484 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 GHRHRQ02643 423 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 PTK2Q05397 1052 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 RRP1BQ14684 758 aaKnown RBP13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 FKBP1CQ5VVH2 108 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 GOLGA6L1Q8N7Z2 621 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 ACTRT1Q8TDG2 376 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 HDAC7Q8WUI4 952 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 FIZ1Q96SL8 496 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 STRA6Q9BX79 667 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 WDR11Q9BZH6 1224 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 BHMT2Q9H2M3 363 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 ADAMTS1Q9UHI8 967 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 NAGPAQ9UK23 515 aa13.7□□□□□ -0.22
ECHDC1-209ENST00000454591 BUB1O43683 1085 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 TBC1D12O60347 775 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 SLITRK3O94933 977 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 GDF11O95390 407 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 MAPTP10636 758 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 BCRP11274 1271 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 SLC9A1P19634 815 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 RFX1P22670 979 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 GUCY2CP25092 1073 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 PSMC2P35998 433 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 PRELPP51888 382 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 SETQ01105 290 aaPredicted RBP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 PPFIA1Q13136 1202 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 PAK2Q13177 524 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 PPP2R5AQ15172 486 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 STXBP4Q6ZWJ1 553 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 SND1Q7KZF4 910 aaKnown RBP eCLIP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 NIPA1Q7RTP0 329 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 FAM160B2Q86V87 743 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 ANKRD13CQ8N6S4 541 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 USP38Q8NB14 1042 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 OLIG1Q8TAK6 271 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 SCFD2Q8WU76 684 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 CHURC1Q8WUH1 139 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 FAM151AQ8WW52 585 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 VTI1AQ96AJ9 217 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 DRC1Q96MC2 740 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 SPAG5Q96R06 1193 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 SYT11Q9BT88 431 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 WDR18Q9BV38 432 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 GOPCQ9HD26 462 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 STXBP5LQ9Y2K9 1186 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 MRPL11Q9Y3B7 192 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 TNS1Q9HBL0 1735 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 NCANO14594 1321 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 RSPH10B2B2RC85 870 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 MEIS1O00470 390 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 ZMYND10O75800 440 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 PPP1R37O75864 691 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 KIF4AO95239 1232 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 VIL1P09327 827 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 RSPH10BP0C881 870 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 RBM5P52756 815 aaKnown RBP eCLIP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 TNNC1P63316 161 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 SKOR1P84550 965 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 USH1GQ495M9 461 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 ALKBH5Q6P6C2 394 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 VPS36Q86VN1 386 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 RASGEF1CQ8N431 466 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 SLC30A5Q8TAD4 765 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 RBM46Q8TBY0 533 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 WHAMMQ8TF30 809 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 LMBR1Q8WVP7 490 aa13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 ZNF622Q969S3 477 aaKnown RBP eCLIP13.69□□□□□ -0.221e-7■□□□□ 9.8
ECHDC1-209ENST00000454591 TDRD3Q9H7E2 651 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 TTC7AQ9ULT0 858 aaPredicted RBP13.69□□□□□ -0.22
ECHDC1-209ENST00000454591 MYH11P35749 1972 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 SMCHD1A6NHR9 2005 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 SHTN1A0MZ66 631 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 GCOM1H8Y6P7 765 aaPredicted RBP13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 PPP1R12BO60237 982 aaPredicted RBP13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 FAM13AO94988 1023 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 GCNT3O95395 438 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 POLR2MP0CAP2 368 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 ACTN1P12814 892 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 ERCC3P19447 782 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 CXCR5P32302 372 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 HSPA1LP34931 641 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 ZNF76P36508 570 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 RAD51AP2Q09MP3 1159 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 ALCAMQ13740 583 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 TCEAL1Q15170 157 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 LRCH2Q5VUJ6 765 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 LRRC31Q6UY01 552 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 ZNF720Q7Z2F6 126 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 C12orf56Q8IXR9 622 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 IQCKQ8N0W5 287 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 SAMD3Q8N6K7 520 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 FAM76AQ8TAV0 307 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 PRMT6Q96LA8 375 aaPredicted RBP13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 NACC1Q96RE7 527 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 CSRNP1Q96S65 589 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 GMLQ99445 158 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 RIT2Q99578 217 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms