RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 CCDC151A5D8V7 595 aa10.88□□□□□ -0.67
CSGALNACT1-203ENST00000454498 BFSP1Q12934 665 aa10.88□□□□□ -0.67
CSGALNACT1-203ENST00000454498 BAATQ14032 418 aaPredicted RBP10.88□□□□□ -0.67
CSGALNACT1-203ENST00000454498 RSPH3Q86UC2 560 aa10.88□□□□□ -0.67
CSGALNACT1-203ENST00000454498 MICALL1Q8N3F8 863 aa10.88□□□□□ -0.67
CSGALNACT1-203ENST00000454498 SH2D3AQ9BRG2 576 aa10.88□□□□□ -0.67
CSGALNACT1-203ENST00000454498 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
CSGALNACT1-203ENST00000454498 ALDH3A1P30838 453 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PTPAQ15257 358 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 ANGEL2Q5VTE6 544 aaKnown RBP10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 CTAGE3PQ8IX95 158 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 GIMAP8Q8ND71 665 aaPredicted RBP10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PSPC1Q8WXF1 523 aaKnown RBP10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 EPB41L5Q9HCM4 733 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 MAD2L2Q9UI95 211 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 RHOBTB3O94955 611 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 LDHAP00338 332 aaKnown RBP10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 MNAT1P51948 309 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 SURF1Q15526 300 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 CCDC6Q16204 474 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 NTRK3Q16288 839 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 C7orf31Q8N865 590 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 C2orf69Q8N8R5 385 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 ZDHHC15Q96MV8 337 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 DEFB129Q9H1M3 183 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 MRPL47Q9HD33 250 aaKnown RBP10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 DAAM1Q9Y4D1 1078 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 SIGLEC1Q9BZZ2 1709 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PASKQ96RG2 1323 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 TBX3O15119 743 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 GMPSP49915 693 aaPredicted RBP10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 B4GALNT4Q76KP1 1039 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 HAUS6Q7Z4H7 955 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 VGLL2Q8N8G2 317 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 ZNF280CQ8ND82 737 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 TCP11Q8WWU5 503 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 SMC6Q96SB8 1091 aa10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 RPF1Q9H9Y2 349 aaKnown RBP10.87□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 A0A1W2PQC6 194 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 MYMKA6NI61 221 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 NDC80O14777 642 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 RGL2O15211 777 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 ITIH3Q06033 890 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 LGSNQ5TDP6 509 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 TRIM50Q86XT4 487 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 FAM213AQ9BRX8 229 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PPANQ9NQ55 473 aaKnown RBP10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 GGA3Q9NZ52 723 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 SEC31AO94979 1220 aaKnown RBP10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 NMT1P30419 496 aaKnown RBP10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 IFRD2Q12894 506 aaPredicted RBP10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 DNAJC24Q6P3W2 148 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PHLDB2Q86SQ0 1253 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 MAP7D3Q8IWC1 876 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 TAB3Q8N5C8 712 aaPredicted RBP10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 AGBL3Q8NEM8 1001 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 RBM46Q8TBY0 533 aaKnown RBP10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 C7orf25Q9BPX7 421 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PARD6BQ9BYG5 372 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 KIAA1586Q9HCI6 787 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 MYOZ2Q9NPC6 264 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PLCB1Q9NQ66 1216 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 ZNF302Q9NR11 478 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 FBXO28Q9NVF7 368 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 UBR1Q8IWV7 1749 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 USP27XA6NNY8 438 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 TRIM49P0CI25 452 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 TRIM49CP0CI26 452 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 HHATQ5VTY9 493 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 SCARA5Q6ZMJ2 495 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 CABS1Q96KC9 395 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PDE11AQ9HCR9 933 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 TUFT1Q9NNX1 390 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 MED4Q9NPJ6 270 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PTPN22Q9Y2R2 807 aa10.86□□□□□ -0.67
CSGALNACT1-203ENST00000454498 ATF2P15336 505 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 C2orf54Q08AI8 447 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 NFX1Q12986 1120 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 SPOUT1Q5T280 376 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 CAPN12Q6ZSI9 719 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 CATSPER4Q7RTX7 472 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 FAM193BQ96PV7 902 aaPredicted RBP10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 SYNJ2BP-COX16A0A087WUM0 186 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 A0A1B0GTH6 734 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 HGSO14964 777 aaPredicted RBP10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 HIP1RO75146 1068 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 VAMP7P51809 220 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 SF3A3Q12874 501 aaKnown RBP eCLIP10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 ZNF394Q53GI3 561 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 ACER1Q8TDN7 264 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PBKQ96KB5 322 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 COX16Q9P0S2 106 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 ABT1Q9ULW3 272 aaKnown RBP10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 WTIPA6NIX2 430 aaPredicted RBP10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 C19orf81C9J6K1 198 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 NR3C2P08235 984 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 PPP1R2P3Q6NXS1 205 aa10.85□□□□□ -0.67
CSGALNACT1-203ENST00000454498 RHOT2Q8IXI1 618 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms