RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, human

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-213	ENST00000454132	EPS8L3	Q8TE67	593 aa	Known RBP	21.33	■■□□□ 1.01
LMBR1-213	ENST00000454132	ATP8B4	Q8TF62	1192 aa		21.33	■■□□□ 1.01
LMBR1-213	ENST00000454132	HAS1	Q92839	578 aa		21.33	■■□□□ 1.01
LMBR1-213	ENST00000454132	RNF25	Q96BH1	459 aa	Predicted RBP	21.33	■■□□□ 1.01
LMBR1-213	ENST00000454132	BMP2K	Q9NSY1	1161 aa	Predicted RBP	21.33	■■□□□ 1.01
LMBR1-213	ENST00000454132	NHSL1	Q5SYE7	1610 aa		21.33	■■□□□ 1.01
LMBR1-213	ENST00000454132	MGRN1	O60291	552 aa		21.33	■■□□□ 1
LMBR1-213	ENST00000454132	FGFR4	P22455	802 aa		21.33	■■□□□ 1
LMBR1-213	ENST00000454132	PON1	P27169	355 aa		21.33	■■□□□ 1
LMBR1-213	ENST00000454132	CDK8	P49336	464 aa		21.33	■■□□□ 1
LMBR1-213	ENST00000454132	FXR2	P51116	673 aa	Known RBP eCLIP	21.33	■■□□□ 1
LMBR1-213	ENST00000454132	EXOC3L4	Q17RC7	722 aa		21.33	■■□□□ 1
LMBR1-213	ENST00000454132	NAIF1	Q69YI7	327 aa	Predicted RBP	21.33	■■□□□ 1
LMBR1-213	ENST00000454132	GLYCTK	Q8IVS8	523 aa		21.33	■■□□□ 1
LMBR1-213	ENST00000454132	KSR1	Q8IVT5	923 aa		21.33	■■□□□ 1
LMBR1-213	ENST00000454132	PROM2	Q8N271	834 aa		21.33	■■□□□ 1
LMBR1-213	ENST00000454132	FAXDC2	Q96IV6	333 aa		21.33	■■□□□ 1
LMBR1-213	ENST00000454132	FAM129A	Q9BZQ8	928 aa		21.33	■■□□□ 1
LMBR1-213	ENST00000454132	DDX25	Q9UHL0	483 aa	Known RBP	21.33	■■□□□ 1
LMBR1-213	ENST00000454132	STK38L	Q9Y2H1	464 aa		21.33	■■□□□ 1
LMBR1-213	ENST00000454132	IGSF9B	Q9UPX0	1349 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	H2AFZ	P0C0S5	128 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	PLA2G4B	P0C869	781 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	ADCY7	P51828	1080 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	ADCY1	Q08828	1119 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	H2AFV	Q71UI9	128 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	NT5DC3	Q86UY8	548 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	FBXO25	Q8TCJ0	367 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	CUL5	Q93034	780 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	SPZ1	Q9BXG8	430 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	PCDHA12	Q9UN75	941 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	CCDC88A	Q3V6T2	1871 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	POTEF	A5A3E0	1075 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	TMEM110-MUSTN1	A8MSY1	372 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	DDX3X	O00571	662 aa	Known RBP eCLIP	21.32	■■□□□ 1	6e-12	■■■■■ 40.3
LMBR1-213	ENST00000454132	CETN3	O15182	167 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	LDHB	P07195	334 aa	Known RBP	21.32	■■□□□ 1
LMBR1-213	ENST00000454132	POTEI	P0CG38	1075 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	ZBTB48	P10074	688 aa	Predicted RBP	21.32	■■□□□ 1
LMBR1-213	ENST00000454132	GALC	P54803	685 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	KCNA1	Q09470	495 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	DCAF12L1	Q5VU92	463 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	POTEG	Q6S5H5	508 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	POTEE	Q6S8J3	1075 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	CCDC25	Q86WR0	208 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	RAB34	Q9BZG1	259 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	SEMA4A	Q9H3S1	761 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	PCDHB13	Q9Y5F0	798 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	SFI1	A8K8P3	1242 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	RPS8	P62241	208 aa	Known RBP	21.32	■■□□□ 1
LMBR1-213	ENST00000454132	LACTB2	Q53H82	288 aa	Predicted RBP	21.32	■■□□□ 1
LMBR1-213	ENST00000454132	KCTD10	Q9H3F6	313 aa		21.32	■■□□□ 1
LMBR1-213	ENST00000454132	THRAP3	Q9Y2W1	955 aa	Known RBP	21.32	■■□□□ 1
LMBR1-213	ENST00000454132	ITGB4	P16144	1822 aa		21.31	■■□□□ 1
LMBR1-213	ENST00000454132	CCDC189	A1A4V9	331 aa		21.31	■■□□□ 1
LMBR1-213	ENST00000454132	PSMD2	Q13200	908 aa		21.31	■■□□□ 1
LMBR1-213	ENST00000454132	TMEM119	Q4V9L6	283 aa		21.31	■■□□□ 1
LMBR1-213	ENST00000454132	ZNF317	Q96PQ6	595 aa	Predicted RBP	21.31	■■□□□ 1
LMBR1-213	ENST00000454132	EPB41L4B	Q9H329	900 aa		21.31	■■□□□ 1
LMBR1-213	ENST00000454132	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	21.31	■■□□□ 1	3e-6	■■■■■ 87
LMBR1-213	ENST00000454132	INTS9	Q9NV88	658 aa	Known RBP	21.31	■■□□□ 1
LMBR1-213	ENST00000454132	PEX19	P40855	299 aa		21.31	■■□□□ 1
LMBR1-213	ENST00000454132	PSMC6	P62333	389 aa		21.31	■■□□□ 1
LMBR1-213	ENST00000454132	DR1	Q01658	176 aa		21.31	■■□□□ 1
LMBR1-213	ENST00000454132	ADAM7	Q9H2U9	754 aa		21.31	■■□□□ 1
LMBR1-213	ENST00000454132	KDM4C	Q9H3R0	1056 aa		21.31	■■□□□ 1
LMBR1-213	ENST00000454132	ARMCX3	Q9UH62	379 aa	Predicted RBP	21.31	■■□□□ 1
LMBR1-213	ENST00000454132	TRIM33	Q9UPN9	1127 aa		21.31	■■□□□ 1
LMBR1-213	ENST00000454132	RGS16	O15492	202 aa	Predicted RBP	21.3	■■□□□ 1
LMBR1-213	ENST00000454132	ANP32D	O95626	131 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	SLURP2	P0DP57	97 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	TTBK2	Q6IQ55	1244 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	TLDC1	Q6P9B6	456 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	CCDC65	Q8IXS2	484 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	TEX11	Q8IYF3	940 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	SPICE1	Q8N0Z3	855 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	ANKS4B	Q8N8V4	417 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	SLC35G2	Q8TBE7	412 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	AGAP11	Q8TF27	550 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	C18orf8	Q96DM3	657 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	AMFR	Q9UKV5	643 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	21.3	■■□□□ 1
LMBR1-213	ENST00000454132	LOC102724428	A0A0B4J2F2	783 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	FLOT1	O75955	427 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	CREB1	P16220	341 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	PMS2	P54278	862 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	SIK1	P57059	783 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	PABPC4	Q13310	644 aa	Known RBP eCLIP	21.3	■■□□□ 1
LMBR1-213	ENST00000454132	TLCD1	Q96CP7	247 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	PTPN22	Q9Y2R2	807 aa		21.3	■■□□□ 1
LMBR1-213	ENST00000454132	DNAJC8	O75937	253 aa	Predicted RBP	21.29	■■□□□ 1
LMBR1-213	ENST00000454132	AKAP3	O75969	853 aa		21.29	■■□□□ 1
LMBR1-213	ENST00000454132	UBOX5	O94941	541 aa		21.29	■■□□□ 1
LMBR1-213	ENST00000454132	PAEP	P09466	180 aa		21.29	■■□□□ 1
LMBR1-213	ENST00000454132	SLC8A1	P32418	973 aa		21.29	■■□□□ 1
LMBR1-213	ENST00000454132	RFC4	P35249	363 aa		21.29	■■□□□ 1
LMBR1-213	ENST00000454132	CCDC50	Q8IVM0	306 aa		21.29	■■□□□ 1
LMBR1-213	ENST00000454132	TAS2R14	Q9NYV8	317 aa		21.29	■■□□□ 1
LMBR1-213	ENST00000454132	SWAP70	Q9UH65	585 aa		21.29	■■□□□ 1
LMBR1-213	ENST00000454132	DAAM1	Q9Y4D1	1078 aa		21.29	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms