RNA–Protein interactions for RNA: ENST00000453724.5

RPE-215, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-215ENST00000453724 SF3A1Q15459 793 aaKnown RBP6.96□□□□□ -1.3
RPE-215ENST00000453724 KRT79Q5XKE5 535 aa6.96□□□□□ -1.3
RPE-215ENST00000453724 GDF6Q6KF10 455 aaPredicted RBP6.96□□□□□ -1.3
RPE-215ENST00000453724 NME8Q8N427 588 aa6.96□□□□□ -1.3
RPE-215ENST00000453724 LMBR1Q8WVP7 490 aa6.96□□□□□ -1.3
RPE-215ENST00000453724 CCDC43Q96MW1 224 aaKnown RBP6.96□□□□□ -1.3
RPE-215ENST00000453724 LBHD1Q9BQE6 289 aaPredicted RBP6.96□□□□□ -1.3
RPE-215ENST00000453724 EIF2AK1Q9BQI3 630 aaKnown RBP6.96□□□□□ -1.3
RPE-215ENST00000453724 NIFKQ9BYG3 293 aaKnown RBP6.96□□□□□ -1.3
RPE-215ENST00000453724 HIPK3Q9H422 1215 aa6.96□□□□□ -1.3
RPE-215ENST00000453724 RNPEPQ9H4A4 650 aa6.96□□□□□ -1.3
RPE-215ENST00000453724 BCAS3Q9H6U6 928 aa6.96□□□□□ -1.3
RPE-215ENST00000453724 ANKEF1Q9NU02 776 aa6.96□□□□□ -1.3
RPE-215ENST00000453724 LRWD1Q9UFC0 647 aa6.96□□□□□ -1.3
RPE-215ENST00000453724 RAPGEFL1Q9UHV5 662 aa6.96□□□□□ -1.3
RPE-215ENST00000453724 TTC3P53804 2025 aa6.96□□□□□ -1.3
RPE-215ENST00000453724 TDRD15B5MCY1 1934 aaKnown RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 SMIM35A0A1B0GVV1 85 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 M0QZ92 97 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 EML1O00423 815 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 PPP6R2O75170 966 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 TIMP1P01033 207 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 INSRRP14616 1297 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 YWHABP31946 246 aaKnown RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 RFC5P40937 340 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 CHMP4BP1P59074 171 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 KRT85P78386 507 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 TBC1D8BQ0IIM8 1120 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 PPIGQ13427 754 aaKnown RBP eCLIP6.95□□□□□ -1.38e-7■■□□□ 13.4
RPE-215ENST00000453724 NBR1Q14596 966 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 SLC39A14Q15043 492 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 ODR4Q5SWX8 454 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 HYIQ5T013 277 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 MFSD5Q6N075 450 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 TMEM199Q8N511 208 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 USP38Q8NB14 1042 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 BANK1Q8NDB2 785 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 SLC7A3Q8WY07 619 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 NACC1Q96RE7 527 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 MAP7D2Q96T17 732 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 CDX2Q99626 313 aaPredicted RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 HSD17B14Q9BPX1 270 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 PYM1Q9BRP8 204 aaKnown RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 NOC4LQ9BVI4 516 aaKnown RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 SCAND2PQ9GZW5 306 aaPredicted RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 PRDM6Q9NQX0 595 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 PRDM5Q9NQX1 630 aaPredicted RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 CYP26B1Q9NR63 512 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 TRMT13Q9NUP7 481 aaKnown RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 KCND2Q9NZV8 630 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 SEPT9Q9UHD8 586 aaPredicted RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 DBR1Q9UK59 544 aaKnown RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 PCDHA2Q9Y5H9 948 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 SRPRBQ9Y5M8 271 aaKnown RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 SQORQ9Y6N5 450 aa6.95□□□□□ -1.3
RPE-215ENST00000453724 PDCD11Q14690 1871 aaKnown RBP6.95□□□□□ -1.3
RPE-215ENST00000453724 FNDC1Q4ZHG4 1894 aaPredicted RBP6.94□□□□□ -1.3
RPE-215ENST00000453724 VWA3AA6NCI4 1184 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 ZBTB42B2RXF5 422 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 SPTLC2O15270 562 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 ZNF862O60290 1169 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 EFCAB14O75071 495 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 DGAT1O75907 488 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 SLITRK3O94933 977 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 C22orf31O95567 290 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 CKBP12277 381 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 SELPP16109 830 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 DDIT3P35638 169 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 CCT6AP40227 531 aaKnown RBP6.94□□□□□ -1.3
RPE-215ENST00000453724 UBA7P41226 1012 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 DNM2P50570 870 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 CYP4A11Q02928 519 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 FPGSQ05932 587 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 STK38Q15208 465 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 PTPAQ15257 358 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 TARBP2Q15633 366 aaKnown RBP6.94□□□□□ -1.3
RPE-215ENST00000453724 UGCGQ16739 394 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 CSPP1Q1MSJ5 1256 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 C9orf50Q5SZB4 431 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 IER5Q5VY09 327 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 FAM109BQ6ICB4 259 aaPredicted RBP6.94□□□□□ -1.3
RPE-215ENST00000453724 PSRC1Q6PGN9 363 aaPredicted RBP6.94□□□□□ -1.3
RPE-215ENST00000453724 MTHFD1LQ6UB35 978 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 LRRC8DQ7L1W4 858 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 TPH2Q8IWU9 490 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 RPUSD2Q8IZ73 545 aaKnown RBP6.94□□□□□ -1.3
RPE-215ENST00000453724 KRI1Q8N9T8 703 aaKnown RBP6.94□□□□□ -1.3
RPE-215ENST00000453724 ZNF579Q8NAF0 562 aaKnown RBP6.94□□□□□ -1.3
RPE-215ENST00000453724 SPRYD3Q8NCJ5 442 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 LINC00301Q8NCQ3 95 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 SNX29Q8TEQ0 813 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 TCP11Q8WWU5 503 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 MYLIPQ8WY64 445 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 GJA10Q969M2 543 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 CALML4Q96GE6 196 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 DYDC2Q96IM9 177 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 CDK5RAP3Q96JB5 506 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 USP28Q96RU2 1077 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 TIPINQ9BVW5 301 aa6.94□□□□□ -1.3
RPE-215ENST00000453724 CCSER1Q9C0I3 900 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 250.7 ms