RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SLC26A4O43511 780 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 BRD1O95696 1058 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 CCNE2O96020 404 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 RPLP2P05387 115 aaKnown RBP9.79□□□□□ -0.84
COL28A1-205ENST00000453441 GNAT1P11488 350 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 MUTP22033 750 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 STAT5BP51692 787 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 SP4Q02446 784 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 GUCA2AQ02747 115 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 ITGA7Q13683 1181 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 PDIA5Q14554 519 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 EPHA7Q15375 998 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 ZNF174Q15697 407 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 HAUS3Q68CZ6 603 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 ABHD15Q6UXT9 468 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 MIER3Q7Z3K6 550 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 KCTD17Q8N5Z5 321 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 SLC43A3Q8NBI5 491 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 ERMNQ8TAM6 284 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 GLG1Q92896 1179 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 VTI1AQ96AJ9 217 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 TOX2Q96NM4 488 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 C16orf70Q9BSU1 422 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 TUT1Q9H6E5 874 aaKnown RBP9.79□□□□□ -0.84
COL28A1-205ENST00000453441 TTC12Q9H892 705 aaPredicted RBP9.79□□□□□ -0.84
COL28A1-205ENST00000453441 ZNF302Q9NR11 478 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 VAV3Q9UKW4 847 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 CFAP45Q9UL16 551 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 SAMM50Q9Y512 469 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 PPME1Q9Y570 386 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 PCDHB6Q9Y5E3 794 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 MYH15Q9Y2K3 1946 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 DDX39AO00148 427 aaKnown RBP9.78□□□□□ -0.84
COL28A1-205ENST00000453441 SLC19A1P41440 591 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 TXKP42681 527 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 MMP16P51512 607 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 SLC39A5Q6ZMH5 540 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 DTHD1Q6ZMT9 781 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 ANKRD33Q7Z3H0 272 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 RETREG3Q86VR2 466 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 C7orf31Q8N865 590 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 DIS3LQ8TF46 1054 aaKnown RBP9.78□□□□□ -0.84
COL28A1-205ENST00000453441 KAT2BQ92831 832 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 FERMT2Q96AC1 680 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 AK8Q96MA6 479 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 UNC45AQ9H3U1 944 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 PCDHGC3Q9UN70 934 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 MAFBQ9Y5Q3 323 aaPredicted RBP9.78□□□□□ -0.84
COL28A1-205ENST00000453441 BRCA2P51587 3418 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 KAT6AQ92794 2004 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 NRCAMQ92823 1304 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 IGSF9BQ9UPX0 1349 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 WDR81Q562E7 1941 aa9.78□□□□□ -0.84
COL28A1-205ENST00000453441 COL1A2P08123 1366 aa9.77□□□□□ -0.84
COL28A1-205ENST00000453441 RRN3P2A6NIE6 340 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 DCDC2CA8MYV0 355 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 HBP1O60381 514 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 YEATS4O95619 227 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 P4HBP07237 508 aaKnown RBP9.77□□□□□ -0.85
COL28A1-205ENST00000453441 ZNF286BP0CG31 522 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 NDUFV2P19404 249 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 DDIT3P35638 169 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 QARSP47897 775 aaKnown RBP9.77□□□□□ -0.85
COL28A1-205ENST00000453441 CDK7P50613 346 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 PSMC5P62195 406 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 SPIRE1Q08AE8 756 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 SF3A1Q15459 793 aaKnown RBP9.77□□□□□ -0.85
COL28A1-205ENST00000453441 KIAA0753Q2KHM9 967 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 NBPF20Q3BBV1 942 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 UTP14CQ5TAP6 766 aaKnown RBP9.77□□□□□ -0.85
COL28A1-205ENST00000453441 PDXDC2PQ6P474 469 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 EXOC8Q8IYI6 725 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 C4orf32Q8N8J7 132 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 ATP8B4Q8TF62 1192 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 IRX2Q9BZI1 471 aaPredicted RBP9.77□□□□□ -0.85
COL28A1-205ENST00000453441 TMEM60Q9H2L4 133 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 BCAS3Q9H6U6 928 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 ZSWIM4Q9H7M6 989 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 TUFT1Q9NNX1 390 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 NRBP2Q9NSY0 501 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 GTF2IRD1Q9UHL9 959 aa9.77□□□□□ -0.85
COL28A1-205ENST00000453441 RBM19Q9Y4C8 960 aaKnown RBP9.77□□□□□ -0.85
COL28A1-205ENST00000453441 WNT7AO00755 349 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 SPTLC1O15269 473 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 CHMP2AO43633 222 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 SORBS3O60504 671 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 LYPLA2O95372 231 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 XRCC6P12956 609 aaKnown RBP eCLIP9.76□□□□□ -0.85
COL28A1-205ENST00000453441 PTGS1P23219 599 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 HOXC8P31273 242 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 LONP1P36776 959 aaKnown RBP9.76□□□□□ -0.85
COL28A1-205ENST00000453441 NASPP49321 788 aaPredicted RBP9.76□□□□□ -0.85
COL28A1-205ENST00000453441 RTP1P59025 263 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 SLC39A14Q15043 492 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 XKR3Q5GH77 459 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 ZNF484Q5JVG2 852 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 KRT79Q5XKE5 535 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 NCAPH2Q6IBW4 605 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 SWSAP1Q6NVH7 229 aa9.76□□□□□ -0.85
COL28A1-205ENST00000453441 CCDC60Q8IWA6 550 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms