RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 ATF5Q9Y2D1 282 aaPredicted RBP17.14■□□□□ 0.33
TRA2B-205ENST00000453386 DCDC2CA8MYV0 355 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 DDX3XO00571 662 aaKnown RBP eCLIP17.13■□□□□ 0.338e-59■■■□□ 18.9
TRA2B-205ENST00000453386 FGGP02679 453 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 IL1R1P14778 569 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 HOXD13P35453 343 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 GABPAQ06546 454 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 SYCE1Q8N0S2 351 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 JPH2Q9BR39 696 aaPredicted RBP17.13■□□□□ 0.33
TRA2B-205ENST00000453386 SUCLA2Q9P2R7 463 aaPredicted RBP17.13■□□□□ 0.33
TRA2B-205ENST00000453386 SWAP70Q9UH65 585 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 SERPINB13Q9UIV8 391 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 TRAPPC3O43617 180 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 NR3C1P04150 777 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 PRKCIP41743 596 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 GTF2IP78347 998 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 C15orf52Q6ZUT6 534 aaKnown RBP17.13■□□□□ 0.33
TRA2B-205ENST00000453386 TMC3Q7Z5M5 1100 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 NT5DC3Q86UY8 548 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 SLFN12Q8IYM2 578 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 SLITRK6Q9H5Y7 841 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
TRA2B-205ENST00000453386 ATP8A1Q9Y2Q0 1164 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 GAKO14976 1311 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 IGKV6D-41A0A0C4DH26 115 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 SRRM3A6NNA2 597 aaPredicted RBP17.13■□□□□ 0.33
TRA2B-205ENST00000453386 RSPH10B2B2RC85 870 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 C6orf229H3BNL8 230 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 GCNT3O95395 438 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 RSPH10BP0C881 870 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 ATP2B4P23634 1241 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 GALCP54803 685 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 CYP4A11Q02928 519 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 QPCTQ16769 361 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 C6orf89Q6UWU4 347 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 BARGINQ6ZT62 677 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 ERMNQ8TAM6 284 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 TRIM51Q9BSJ1 452 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 BCAS3Q9H6U6 928 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 OSGEPQ9NPF4 335 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 AMFRQ9UKV5 643 aa17.13■□□□□ 0.33
TRA2B-205ENST00000453386 PDXKO00764 312 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 ATP2C2O75185 946 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 SLURP2P0DP57 97 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 ZBTB48P10074 688 aaPredicted RBP17.12■□□□□ 0.33
TRA2B-205ENST00000453386 ABCB4P21439 1286 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 RPL13P26373 211 aaKnown RBP17.12■□□□□ 0.33
TRA2B-205ENST00000453386 QRICH1Q2TAL8 776 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 TBC1D22AQ8WUA7 517 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 DDX4Q9NQI0 724 aaKnown RBP17.12■□□□□ 0.33
TRA2B-205ENST00000453386 KLC4Q9NSK0 619 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 GGA2Q9UJY4 613 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 CDR1P51861 262 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 KCNA1Q09470 495 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 SLFN11Q7Z7L1 901 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 RAPGEF5Q92565 580 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 SLC35C1Q96A29 364 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 MYCBPQ99417 103 aaPredicted RBP17.12■□□□□ 0.33
TRA2B-205ENST00000453386 METTL14Q9HCE5 456 aaKnown RBP17.12■□□□□ 0.33
TRA2B-205ENST00000453386 CD248Q9HCU0 757 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 SIX2Q9NPC8 291 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 PLIN4Q96Q06 1357 aa17.12■□□□□ 0.33
TRA2B-205ENST00000453386 COL5A3P25940 1745 aaPredicted RBP17.12■□□□□ 0.33
TRA2B-205ENST00000453386 SFI1A8K8P3 1242 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 AGBL2Q5U5Z8 902 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 CPLX4Q7Z7G2 160 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 GLYCTKQ8IVS8 523 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 RASGEF1CQ8N431 466 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 GOPCQ9HD26 462 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 GEMIN8Q9NWZ8 242 aaKnown RBP17.11■□□□□ 0.33
TRA2B-205ENST00000453386 STXBP5LQ9Y2K9 1186 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 NR2E1Q9Y466 385 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 WNK3Q9BYP7 1800 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 MYH4Q9Y623 1939 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 PHF20L1A8MW92 1017 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 BUB1BO60566 1050 aaPredicted RBP17.11■□□□□ 0.33
TRA2B-205ENST00000453386 COPB2P35606 906 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 STAT1P42224 750 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 SMTNP53814 917 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 SEC16BQ96JE7 1060 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 BHMT2Q9H2M3 363 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 FAM114A2Q9NRY5 505 aa17.11■□□□□ 0.33
TRA2B-205ENST00000453386 SEPT11Q9NVA2 429 aaKnown RBP17.11■□□□□ 0.33
TRA2B-205ENST00000453386 TBCAO75347 108 aaKnown RBP17.1■□□□□ 0.33
TRA2B-205ENST00000453386 CACNA2D3Q8IZS8 1091 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 SYT2Q8N9I0 419 aaPredicted RBP17.1■□□□□ 0.33
TRA2B-205ENST00000453386 SLC35G2Q8TBE7 412 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 HES6Q96HZ4 224 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 LRRC4CQ9HCJ2 640 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 TYW1Q9NV66 732 aaKnown RBP17.1■□□□□ 0.33
TRA2B-205ENST00000453386 POLLQ9UGP5 575 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 F8VZ95 297 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 EVI5O60447 810 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 SPATA31C1P0DKV0 1188 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 FERP16591 822 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 JAM2P57087 298 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 ARHGAP4P98171 946 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 MDM1Q8TC05 714 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 PSMD1Q99460 953 aa17.1■□□□□ 0.33
TRA2B-205ENST00000453386 IKZF4Q9H2S9 585 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms