RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 TUBB4BP68371 445 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 CCDC40Q4G0X9 1142 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 APOBEC3FQ8IUX4 373 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 SYT17Q9BSW7 474 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 PLEKHA4Q9H4M7 779 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 RPAP3Q9H6T3 665 aaPredicted RBP16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 RAVER2Q9HCJ3 691 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 PLAGL2Q9UPG8 496 aa16.82■□□□□ 0.28
CCHCR1-208ENST00000451521 RLFQ13129 1914 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 RSPH10B2B2RC85 870 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 CHMP2AO43633 222 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 FLOT1O75955 427 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 RSPH10BP0C881 870 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 HIRAP54198 1017 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 TUBB2AQ13885 445 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 PCNX4Q63HM2 1172 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 NEK9Q8TD19 979 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 SYTL5Q8TDW5 730 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 TUBB2BQ9BVA1 445 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 GBP3Q9H0R5 595 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 MED4Q9NPJ6 270 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 CEP83Q9Y592 693 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 UBIAD1Q9Y5Z9 338 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 DICER1Q9UPY3 1922 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 CTAGE9A4FU28 777 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 PDXKO00764 312 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 EPHB6O15197 1021 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 ABL1P00519 1130 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 CCDC172P0C7W6 258 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 ALAS1P13196 640 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 BACE1P56817 501 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 KCNMA1Q12791 1236 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 ADAM9Q13443 819 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 ILDR2Q71H61 639 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 CPXCR1Q8N123 301 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 PIGOQ8TEQ8 1089 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 ZKSCAN4Q969J2 545 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 NACC1Q96RE7 527 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 NHEJ1Q9H9Q4 299 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 KCND2Q9NZV8 630 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 FAM184BQ9ULE4 1060 aa16.81■□□□□ 0.28
CCHCR1-208ENST00000451521 CETN3O15182 167 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 TBCAO75347 108 aaKnown RBP16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 CYLC1P35663 651 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 HERVK_113P62684 666 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 SLC35F6Q8N357 371 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 IL31RAQ8NI17 732 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 AS3MTQ9HBK9 375 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 GGA3Q9NZ52 723 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 WRAP73Q9P2S5 460 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 ZBED4O75132 1171 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 PPFIA4O75335 1185 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 MYBP10242 640 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 PTPRAP18433 802 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 KRT83P78385 493 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 SPP2Q13103 211 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 C12orf42Q96LP6 360 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 HAUS4Q9H6D7 363 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 MMRN2Q9H8L6 949 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 KCNH7Q9NS40 1196 aa16.8■□□□□ 0.28
CCHCR1-208ENST00000451521 CTAGE15A4D2H0 777 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 DHX15O43143 795 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 CTAGE8P0CG41 777 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 MRPS9P82933 396 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 TKFCQ3LXA3 575 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 CTAGE6Q86UF2 777 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 CTAGE4Q8IX94 777 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 ZNF280CQ8ND82 737 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 BAP1Q92560 729 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 JADE2Q9NQC1 790 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 FAM207AQ9NSI2 230 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 RNF181Q9P0P0 153 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 VWA5AO00534 786 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 EIF3DO15371 548 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 CALUO43852 315 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 CPP00450 1065 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 NR2F2P24468 414 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 ZNF131P52739 623 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 FRMD5Q7Z6J6 570 aa16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 NOA1Q8NC60 698 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 AGO4Q9HCK5 861 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 TYW1Q9NV66 732 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCHCR1-208ENST00000451521 COL11A1P12107 1806 aaPredicted RBP16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 ZBTB39O15060 712 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 RNF40O75150 1001 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 PRPF6O94906 941 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 EFCAB13Q8IY85 973 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 ACBD3Q9H3P7 528 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 GPRC5DQ9NZD1 345 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 SEL1LQ9UBV2 794 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 ASTN1O14525 1302 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 RPS6P62753 249 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 WHAMMP3Q1A5X7 153 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 CCDC155Q8N6L0 562 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 TAAR1Q96RJ0 339 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 WRNIP1Q96S55 665 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 LXNQ9BS40 222 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 BCAS3Q9H6U6 928 aa16.78■□□□□ 0.28
CCHCR1-208ENST00000451521 ODF2LQ9ULJ1 636 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms