RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 MMP16P51512 607 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 ZNF543Q08ER8 600 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 NR6A1Q15406 480 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 GPATCH4Q5T3I0 446 aaKnown RBP8.54□□□□□ -1.04
RBM39-218ENST00000449489 GPKOWQ92917 476 aaPredicted RBP eCLIP8.54□□□□□ -1.048e-20■□□□□ 10.1
RBM39-218ENST00000449489 CHMP4CQ96CF2 233 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 SPATA33Q96N06 139 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 TTC14Q96N46 770 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 CNTNAP3BQ96NU0 1288 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 NECTIN4Q96NY8 510 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 MTRQ99707 1265 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 ARID3AQ99856 593 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 TMEM47Q9BQJ4 181 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 USP26Q9BXU7 913 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 CNTNAP3Q9BZ76 1288 aa8.54□□□□□ -1.04
RBM39-218ENST00000449489 MAP3K20Q9NYL2 800 aaKnown RBP8.54□□□□□ -1.04
RBM39-218ENST00000449489 MRPL42Q9Y6G3 142 aaKnown RBP8.54□□□□□ -1.04
RBM39-218ENST00000449489 PLXNA4Q9HCM2 1894 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 MYH6P13533 1939 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 CHRNA1P02708 482 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 RPLP2P05387 115 aaKnown RBP8.53□□□□□ -1.04
RBM39-218ENST00000449489 CTSHP09668 335 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 HSPD1P10809 573 aaKnown RBP8.53□□□□□ -1.04
RBM39-218ENST00000449489 AOC1P19801 751 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 ARHGEF16Q5VV41 709 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 ANKRD54Q6NXT1 300 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 TAF2Q6P1X5 1199 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 SYCE2Q6PIF2 218 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 RBM23Q86U06 439 aaKnown RBP8.53□□□□□ -1.04
RBM39-218ENST00000449489 NPAS4Q8IUM7 802 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 SIRT2Q8IXJ6 389 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 CCDC105Q8IYK2 499 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 SAMD3Q8N6K7 520 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 VN1R2Q8NFZ6 395 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 TBC1D5Q92609 795 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 FTHL17Q9BXU8 183 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 PXMP2Q9NR77 195 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 ECHDC1Q9NTX5 307 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 COL20A1Q9P218 1284 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 SQORQ9Y6N5 450 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 NRCAMQ92823 1304 aa8.53□□□□□ -1.04
RBM39-218ENST00000449489 FRYQ5TBA9 3013 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 M0R2C6 588 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 FSCN2O14926 492 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 RANBP6O60518 1105 aaKnown RBP8.52□□□□□ -1.05
RBM39-218ENST00000449489 GGPS1O95749 300 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 F12P00748 615 aaPredicted RBP8.52□□□□□ -1.05
RBM39-218ENST00000449489 LGALS2P05162 132 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 STAG3L1P0CL83 205 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 SDHBP21912 280 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 ITIH3Q06033 890 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 MGAT3Q09327 533 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 LPIN1Q14693 890 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 ANGPT1Q15389 498 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 STOX1Q6ZVD7 989 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 VSIG10LQ86VR7 867 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 ZDHHC14Q8IZN3 488 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 BORCS6Q96GS4 357 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 RTP3Q9BQQ7 232 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 MFSD1Q9H3U5 465 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 FKBPLQ9UIM3 349 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 LZTS1Q9Y250 596 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 USTQ9Y2C2 406 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 MRPL11Q9Y3B7 192 aaKnown RBP8.52□□□□□ -1.05
RBM39-218ENST00000449489 PCDHB12Q9Y5F1 795 aa8.52□□□□□ -1.05
RBM39-218ENST00000449489 FRMPD2Q68DX3 1309 aaPredicted RBP8.52□□□□□ -1.05
RBM39-218ENST00000449489 PER2O15055 1255 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 GHRP10912 638 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 EIF2AK2P19525 551 aaKnown RBP8.51□□□□□ -1.05
RBM39-218ENST00000449489 UBA1P22314 1058 aaKnown RBP8.51□□□□□ -1.05
RBM39-218ENST00000449489 CTHP32929 405 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 NT5C2P49902 561 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 HSD17B4P51659 736 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 SP2Q02086 613 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 USH1GQ495M9 461 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 FBXO47Q5MNV8 452 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 TSHZ1Q6ZSZ6 1077 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 RSPH3Q86UC2 560 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 DTWD2Q8NBA8 298 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 MICAL1Q8TDZ2 1067 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 GLMNQ92990 594 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 PDCD2LQ9BRP1 358 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 LRRCC1Q9C099 1032 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 ADAM7Q9H2U9 754 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 MLXIPQ9HAP2 919 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 AAASQ9NRG9 546 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 SETD4Q9NVD3 440 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 EVA1BQ9NVM1 165 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 ZNF215Q9UL58 517 aaPredicted RBP8.51□□□□□ -1.05
RBM39-218ENST00000449489 MTMR7Q9Y216 660 aa8.51□□□□□ -1.05
RBM39-218ENST00000449489 SMG1Q96Q15 3661 aaKnown RBP8.5□□□□□ -1.05
RBM39-218ENST00000449489 DSPP15924 2871 aaKnown RBP8.5□□□□□ -1.05
RBM39-218ENST00000449489 C2CD4DB7Z1M9 353 aa8.5□□□□□ -1.05
RBM39-218ENST00000449489 RBAK-RBAKDNI3L0D1 243 aa8.5□□□□□ -1.05
RBM39-218ENST00000449489 PCP11498 1178 aaKnown RBP8.5□□□□□ -1.05
RBM39-218ENST00000449489 NPR3P17342 541 aa8.5□□□□□ -1.05
RBM39-218ENST00000449489 TECP42680 631 aa8.5□□□□□ -1.05
RBM39-218ENST00000449489 MTHFRP42898 656 aa8.5□□□□□ -1.05
RBM39-218ENST00000449489 ALX1Q15699 326 aa8.5□□□□□ -1.05
RBM39-218ENST00000449489 FNDC1Q4ZHG4 1894 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms