RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	C1orf186	Q6ZWK4	172 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	GOLGA6L1	Q8N7Z2	621 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	C7orf43	Q8WVR3	580 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	CES2	O00748	559 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	ECE1	P42892	770 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	SLC5A5	Q92911	643 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	GDF3	Q9NR23	364 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	CWC15	Q9P013	229 aa	Known RBP	18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	ZNF219	Q9P2Y4	722 aa	Predicted RBP	18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	NAGPA	Q9UK23	515 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	TULP2	O00295	520 aa		18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	NNT	Q13423	1086 aa		18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	CTTN	Q14247	550 aa	Known RBP	18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	PIGO	Q8TEQ8	1089 aa		18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	SH3GL2	Q99962	352 aa		18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	ARHGEF10L	Q9HCE6	1279 aa		18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	POLD4	Q9HCU8	107 aa		18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	AJAP1	Q9UKB5	411 aa	Predicted RBP	18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	TMX2	Q9Y320	296 aa		18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	IVL	P07476	585 aa		18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	LRCH2	Q5VUJ6	765 aa		18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	IFT20	Q8IY31	132 aa		18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	DYDC2	Q96IM9	177 aa		18.53	■□□□□ 0.56
TOM1-210	ENST00000449058	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.53	■□□□□ 0.56	5e-10	■■■■■ 75
TOM1-210	ENST00000449058	CLIC2	O15247	247 aa		18.52	■□□□□ 0.56
TOM1-210	ENST00000449058	GLI1	P08151	1106 aa		18.52	■□□□□ 0.56
TOM1-210	ENST00000449058	TCERG1L	Q5VWI1	586 aa		18.52	■□□□□ 0.56
TOM1-210	ENST00000449058	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	18.52	■□□□□ 0.56
TOM1-210	ENST00000449058	ACER1	Q8TDN7	264 aa		18.52	■□□□□ 0.56
TOM1-210	ENST00000449058	GCNT4	Q9P109	453 aa		18.52	■□□□□ 0.56
TOM1-210	ENST00000449058	PACSIN2	Q9UNF0	486 aa	Predicted RBP	18.52	■□□□□ 0.56
TOM1-210	ENST00000449058	SFI1	A8K8P3	1242 aa		18.52	■□□□□ 0.55
TOM1-210	ENST00000449058	YDJC	A8MPS7	323 aa		18.52	■□□□□ 0.55
TOM1-210	ENST00000449058	FAM13A	O94988	1023 aa		18.52	■□□□□ 0.55
TOM1-210	ENST00000449058	CFB	P00751	764 aa		18.52	■□□□□ 0.55
TOM1-210	ENST00000449058	MUT	P22033	750 aa		18.52	■□□□□ 0.55
TOM1-210	ENST00000449058	LRRC57	Q8N9N7	239 aa		18.52	■□□□□ 0.55
TOM1-210	ENST00000449058	TSEN2	Q8NCE0	465 aa	Known RBP	18.52	■□□□□ 0.55
TOM1-210	ENST00000449058	LOXHD1	Q8IVV2	1947 aa		18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	GCOM1	H8Y6P7	765 aa	Predicted RBP	18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	POLR2M	P0CAP2	368 aa		18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	NMT1	P30419	496 aa	Known RBP	18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	ALS2CL	Q60I27	953 aa		18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	ALKBH5	Q6P6C2	394 aa	Known RBP	18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	LRRC31	Q6UY01	552 aa		18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	SLC30A10	Q6XR72	485 aa		18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	TPH2	Q8IWU9	490 aa		18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	CNKSR1	Q969H4	720 aa		18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	FIZ1	Q96SL8	496 aa		18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	RANBP17	Q9H2T7	1088 aa	Known RBP	18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	TMEM59L	Q9UK28	342 aa		18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	PCDHB13	Q9Y5F0	798 aa		18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	FRMPD4	Q14CM0	1322 aa		18.51	■□□□□ 0.55
TOM1-210	ENST00000449058	APBA3	O96018	575 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	CHRNA5	P30532	468 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	DNA2	P51530	1060 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	PRELP	P51888	382 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	ZNF131	P52739	623 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	IFI16	Q16666	785 aa	Known RBP	18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	MYCT1	Q8N699	235 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	USP38	Q8NB14	1042 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	MKNK1	Q9BUB5	465 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	GOPC	Q9HD26	462 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	SEL1L	Q9UBV2	794 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	UBE4B	O95155	1302 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	FLOT1	O75955	427 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	CLSTN1	O94985	981 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	HEXIM1	O94992	359 aa	Known RBP	18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	PSMC2	P35998	433 aa	Known RBP	18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	RPS6KA1	Q15418	735 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	FAM186B	Q8IYM0	893 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	IKZF4	Q9H2S9	585 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	PARVG	Q9HBI0	331 aa		18.5	■□□□□ 0.55
TOM1-210	ENST00000449058	SHTN1	A0MZ66	631 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	GOLGA6C	A6NDK9	693 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	ZBTB39	O15060	712 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	SHOX2	O60902	331 aa	Predicted RBP	18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	KIF4A	O95239	1232 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	VIL1	P09327	827 aa	Known RBP	18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	GOLGA6D	P0CG33	693 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	ZBTB48	P10074	688 aa	Predicted RBP	18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	FAM76A	Q8TAV0	307 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	GOLGA6A	Q9NYA3	693 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	INTU	Q9ULD6	942 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	MYH11	P35749	1972 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	GOLGA8K	D6RF30	607 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	CHMP2A	O43633	222 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	CARS	P49589	748 aa	Known RBP	18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	CEP55	Q53EZ4	464 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	GJB7	Q6PEY0	223 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	CCDC174	Q6PII3	467 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	TAF4B	Q92750	862 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	PBK	Q96KB5	322 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	EPB41L5	Q9HCM4	733 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	KCND2	Q9NZV8	630 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058	ZBTB21	Q9ULJ3	1066 aa		18.49	■□□□□ 0.55
TOM1-210	ENST00000449058		A0A0A6YYK5	440 aa	Predicted RBP	18.48	■□□□□ 0.55
TOM1-210	ENST00000449058	SPDYE2B	A6NHP3	402 aa		18.48	■□□□□ 0.55
TOM1-210	ENST00000449058	TCP10L2	B9ZVM9	353 aa		18.48	■□□□□ 0.55

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